Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0501 ATGAGATGTAATGAGAATTCCCTGCCGTTTTGTTCTTGCTTGACTGCCTTTAAGCCAAAGTCGCAGACTGAATGGGATCTGCTGGATCACTCAGGTGGGTGTGAGAGGAAAGCCAAGTTAAAATGTGAGACTCCAACTTCATCAAATAGGGAGAAAGACGGTGACGTTTGTTCTGTTTGGAATGGAGATTTATTGAGTCTGCAGCAACTTTCTCAAGATGAAAGTAATGAAGAAACTTTATATCTAAAACTTGCAGCTTCTGAGTTTTCAGATGCTGAACACGAAAAGCAAAACATTATTGGGGTATTAAGAATCCTCACAAACATGAGAGGGACGAGAGGTTATCTTGCCCCAGAGTGGATTTCTGGTGTGGCTATCCCACCGAAAGTTGATGTTTACAGTTATGGAACCATGCTATTCAAATTGGTGTCAGGAAGAAGAAACTGTGAGGCATCTAAAGATGGGGAAGTGAAGTTCTTTCCTACATGGGGCTGCAAATGTAGTAATCCAAGGAGTTGA 519 0.4181 MRCNENSLPFCSCLTAFKPKSQTEWDLLDHSGGCERKAKLKCETPTSSNREKDGDVCSVWNGDLLSLQQLSQDESNEETLYLKLAASEFSDAEHEKQNIIGVLRILTNMRGTRGYLAPEWISGVAIPPKVDVYSYGTMLFKLVSGRRNCEASKDGEVKFFPTWGCKCSNPRS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0501 172 Gene3D Transferase(Phosphotransferase) domain 1 23 160 - -
Lele29g0501 172 SUPERFAMILY Protein kinase-like (PK-like) 104 164 IPR011009 -
Lele29g0501 172 Pfam Protein kinase domain 93 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0501 172 PANTHER OS07G0415500 PROTEIN 104 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0501 Lele-ChrLele29 3027742 3029332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0501 104 149 Receptor kinase-like Gene Family AT5G20050 56.522 1.51e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele29g0501 Pkinase 2.4e-09 CL0016