Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0464 ATGCCAGTATTATGCGTGTTTGTAGAGTTCTCTTTTGTTATTTGGGACCTGGTGATGCTTTTGCATATTGAGAACTATCCTTACTTAGTGGTTTATTATAATCAGAAGAAGTCCTTCAGCGAGAACCTAGCGAGGGCGAAGTTCATGTCTGAATTCGATTCACAGACTCCAAATGCTTATGATCCCTTTGCTGATGCAAATGCTGAGGACTCGGGTGCTGGGACAAAAGAGTATGTTCATGTTCGTGTGCAACAACGCAATGGAAGGAAAAGTCTGACAACTGTTCAAGGGTTGAAGAAAGAGTACAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTCCAAGATCCTGAATTGGGACAGGTCATACAGCTTCAGGGAGATCAAAGGAAGAACGTTTCCACATTCCTTGTGCAGGCTGGTATAGTAAAGAAGGAGCAGATCAAGATTCATGGTTTCTAA 486 0.4239 MPVLCVFVEFSFVIWDLVMLLHIENYPYLVVYYNQKKSFSENLARAKFMSEFDSQTPNAYDPFADANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEQIKIHGF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0464 161 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 54 161 IPR005874 GO:0003743
Lele29g0464 161 Gene3D - 38 161 - -
Lele29g0464 161 SUPERFAMILY eIF1-like 50 161 IPR036877 GO:0003743|GO:0006413
Lele29g0464 161 CDD eIF1_SUI1 77 160 IPR005874 GO:0003743
Lele29g0464 161 FunFam Eukaryotic translation initiation factor SUI1 50 161 - -
Lele29g0464 161 Pfam Translation initiation factor SUI1 76 150 IPR001950 GO:0003743|GO:0006413
Lele29g0464 161 ProSiteProfiles Translation initiation factor SUI1 family profile. 79 149 IPR001950 GO:0003743|GO:0006413
Lele29g0464 161 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 56 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0464 Lele-ChrLele29 2838442 2839818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0464 49 161 Eukaryotic Initiation Factors Gene Family AT4G27130 91.150 2.05e-75 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0464 29 2838442 2839818 Lele31g1081 31 17628037 17634465 hybridization
Lele29g0464 29 2838442 2839818 Lele32g0444 32 2800969 2802089 hybridization