Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0458 ATGATTCCGGCGAGAAACATGCCCTCCATGATCGGAAGGAACAGCAACGTTAGCGCTGCGTTAGGTTCATCCTCGGGCCTTTCTCTTGGTCAGCAGCCAAACATGATGGAAGGTCAGTTCCTCTCAGCACTGGACATGGCTCCAAACACATCGGAGAGCGACATCCCTCGAATCCGAGATGACGATTTCGACACCGCCACCAAGTCCGGCAGCGAAAATCAGGAAAATGGCGCCTCCGGTGACGACCAAGACCAACGCCCCAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTCAAGGAGTGCCCTCACCCCGACGACAAGCAAAGGAAGGAGCTGAGTCGTGAATTAGGGTTGGAGCCATTGCAGGTCAAGTTCTGGTTCCAAAACAAGCGCACCCAGATGAAGAACCAACATGAGCGGCATGAGAACTCACACCTTAGAGCCGAAAACGAAAAGCTTCGTGCAGATAACATGAGGTACAGAGAAGCTCTTAGCAATGCCTCTTGTCCTAACTGTGGTGGACCAACCGCTATAGGAGAAATGTCCTTCGATGAACATCATTTGAGACTCGAAAATTCCCGCCTTAGGGAAGAGATCGATAGAATTTCAGCAATTGCTGCCAAGTACGTAGGGAAGCCAGTGGTGAACTATGCGTTACTTTCTCCATCTTCGGTTCCACCTCGTCCTTTAGAGCTTGGGGTTGGTGGTGGTTATGTTGGACCGGCGGGGATTGGTGGCGGCGCTGGAGACATTTATGGAGGGGCCGGAGATCTGTTGAGGTCGATAAGTGGACTCACGGAAGCCGATAAGCCGATGATCATAGAGCTTGCAGTTGCGGCCATGGAAGAACTGGTGAGGATGGCTCAGATGGGAGAGCCTCTTTGGATGACCACCCTGGATGGCTCCACCGCTGTGCTGAATGAAAACGAGTATATGAGATCTTTTCCTCGAGGAATTGGCCCTAAACCCACTGGCTTGAGATGCGAAGCTTCTAGAGAAACTGCAGTCGTCATCACGAATCACATCAACCTCGTCGAGATTCTCATGGATGTGAACCAGTGGTCGACAGTGTTCTCTGGGATAGTGTCAAGAGCAATGACTATGGAAGTACTGTCAACGGGGGTGGCTGGGAACTACAACGGTGCCTTGCAAGTGATGACAGCAGAGTTACAAGTGCCTTCGCCTCTAGTGCCAACTCGAGAGAGTTATTTCGTGAGATATTGCAAGCAGCACAGTGACGGGACATGGGCCGTGGTGGACGTGTCTCTGGACCATCTCAGCACTGCTCCCGTCAAATGTAGAAGACGACCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTATTCCAAGGTGACGTGGATCGAACATGTCGAAGTGGATGATAGAGGCGTACATAGTCTATACAAGCAGCTTGTTAGTTCAGGCCATGCATTTGGTGCCAAACGATGGGTTGCCACCTTAGATCGACAGTGCGAAAGGCTTGCTAGTGCCATGGCTTCCAACATTCCCGCCGGTGATGTAGGAGTGATAACAAACCAAGACGGGAGGAGGAGTATGTTGAAGCTGGCTGAGAGAATGGTGATAAGCTTCTGCGCCGGAGTGAGCGCTTCCACGGCTCACACATGGACAACACTCTCTGGAACCGGGGCCGATGATGTTCGGGTCATGACCCGAAAGAGCGTCGACGACCCGGGAAGACCACCTGGCATCGTTCTAAGCGCTGCAACCTCCTTTTGGCTTCCTGTTCCTCCCAAGCGAGTTTTTGATTTCCTCCGTGATGAAAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGTGGGGTGATCCAAGAAATGGCACACATAGCTAACGAACAAGATACAGGGAACTGTGTTTCCCTACTCCGAGTTAATAGTGCGAATTCGAGCCAAAGTAATATGTTGATACTGCAAGAGAGCTGCTCAGACTCAACGGGGTCATTCGTGATATATGCTCCCGTGGATATAGGGGCCATGAACGTGGTTCTGAATGGAGGGGATCCTGACTACGTCGCACTTCTTCCTTCGGGTTTTGCTATCCTCCCCGATGGTACCACGACTCATGGAGGAGGTGGCATTACTGAAACAGGCCACGGTGGATCCCTCTTGACCGTTGCTTTTCAAATCTTGGTTGATTCCGTGCCCACTGCTAAGCTCTCCCTTGGATCGGTCGCAACTGTCAATAACCTTATTGCCTGTACTGTGGAGCGAATTAAGGCTTCTTTATCTTGTGAAGCTGCTTGA 2292 0.5131 MIPARNMPSMIGRNSNVSAALGSSSGLSLGQQPNMMEGQFLSALDMAPNTSESDIPRIRDDDFDTATKSGSENQENGASGDDQDQRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSHLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENSRLREEIDRISAIAAKYVGKPVVNYALLSPSSVPPRPLELGVGGGYVGPAGIGGGAGDIYGGAGDLLRSISGLTEADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGSTAVLNENEYMRSFPRGIGPKPTGLRCEASRETAVVITNHINLVEILMDVNQWSTVFSGIVSRAMTMEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHSDGTWAVVDVSLDHLSTAPVKCRRRPSGCLIQEMPNGYSKVTWIEHVEVDDRGVHSLYKQLVSSGHAFGAKRWVATLDRQCERLASAMASNIPAGDVGVITNQDGRRSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEWDILSNGGVIQEMAHIANEQDTGNCVSLLRVNSANSSQSNMLILQESCSDSTGSFVIYAPVDIGAMNVVLNGGDPDYVALLPSGFAILPDGTTTHGGGGITETGHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0458 763 Gene3D - 74 163 - -
Lele29g0458 763 ProSitePatterns 'Homeobox' domain signature. 121 144 IPR017970 GO:0000981|GO:0006355
Lele29g0458 763 ProSiteProfiles START domain profile. 275 506 IPR002913 GO:0008289
Lele29g0458 763 ProSiteProfiles 'Homeobox' domain profile. 86 146 IPR001356 GO:0003677
Lele29g0458 763 SMART HOX_1 87 150 IPR001356 GO:0003677
Lele29g0458 763 FunFam Homeobox-leucine zipper protein HDG1 74 162 - -
Lele29g0458 763 Gene3D - 352 500 IPR023393 -
Lele29g0458 763 Pfam START domain 285 503 IPR002913 GO:0008289
Lele29g0458 763 SUPERFAMILY Homeodomain-like 78 146 IPR009057 -
Lele29g0458 763 FunFam Homeobox-leucine zipper protein GLABRA 2 284 502 - -
Lele29g0458 763 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 85 758 IPR042160 -
Lele29g0458 763 CDD homeodomain 89 147 IPR001356 GO:0003677
Lele29g0458 763 CDD START_ArGLABRA2_like 279 502 - -
Lele29g0458 763 SUPERFAMILY Bet v1-like 523 755 - -
Lele29g0458 763 MobiDBLite consensus disorder prediction 54 68 - -
Lele29g0458 763 Pfam Homeodomain 89 145 IPR001356 GO:0003677
Lele29g0458 763 MobiDBLite consensus disorder prediction 49 97 - -
Lele29g0458 763 SMART START_1 284 503 IPR002913 GO:0008289
Lele29g0458 763 Coils Coil 140 172 - -
Lele29g0458 763 SUPERFAMILY Bet v1-like 276 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0458 Lele-ChrLele29 2793374 2797363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0458 58 763 Homeobox Transcription Factor Family AT1G05230 80.731 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele29g0458 START 3.4e-57 CL0209