Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0426 ATGTCCTCCAACAGTCCAGATCATTCTTCCAGGGTTCACTCTCCTCCATATGTAGTGGACGACTGTCGCGGCGTCCTTCAAGTTTACAGCGACGGTTCCATCGTACGTTCTCCAAAGCCAAGCTTCAACGTTCCCGTCCACGACGACGGCTCTGTTCTGTGGAAAGATGTCGTTTTCGACCCTACCCATAACCTTCAGCTTCGTCTCTACAAGCCCGCTGATTCGTCTTCCTCCTCCAAGCTTCCCATTTTCTTCTATATCCACGGGGGTGGCTTCTGCATCGGCTCCTTTACCTGGCCCAACTTTCACAACTACTGCCTCCGCCTCGCTTCGGAGCTCCGAGCCGTCGTCATCTCGCCGGACTATCGGCTGGCCCCGGAGAACCGACTCCCAGCCGCTATAGATGACGCATTCGCGGTGGTCAAGTGGCTCCAGGCTCAAGCCAAGAGCGATGACCCGGATCCGTGGCTGAGAGGAGTGGCCGATTTTAACCGAGCGTTCATTTCAGGCGACTCCGCAGGCGGAAACATTGCTCACCATCTGGCTGTTGGACTGGGCCGTGGATCCCCCGAATTGGCGCCGGTGCGGGTCAGAGGTTACATCCTTCTGGCACCCTTCTTTAGCGGCACCGCCAGAACCCAATTGGAGGCTGAAGGTCCAAAAGACGCTTTCCTCAATTTAGAACTCATGGACAGATTTTGGAGGCTCTCTGTTCCGATTGGAGCTGACAGGGATCATCCCCTTGTGAATCTATTTGGGCCAATGAACAATAGCTTTGAAGGCACTGATCTTGATCCTATACTAGTGGTGGTCGGAGGAAGTGATTTGCTGAGAGATAGGTGTAAGGATTATGCAGATAAGCTGAAGAATTGGGGGAAGAACATGGATTATGAAGAATTTGAAGGAAAGCAACATGGATTCTTCACTGTTGATCCTAATTCAGAAGATGCAAATAAGTTGATGCTCAGCATCAAACAATTCATAGAGAAACATTCATTCTGA 1002 0.514 MSSNSPDHSSRVHSPPYVVDDCRGVLQVYSDGSIVRSPKPSFNVPVHDDGSVLWKDVVFDPTHNLQLRLYKPADSSSSSKLPIFFYIHGGGFCIGSFTWPNFHNYCLRLASELRAVVISPDYRLAPENRLPAAIDDAFAVVKWLQAQAKSDDPDPWLRGVADFNRAFISGDSAGGNIAHHLAVGLGRGSPELAPVRVRGYILLAPFFSGTARTQLEAEGPKDAFLNLELMDRFWRLSVPIGADRDHPLVNLFGPMNNSFEGTDLDPILVVVGGSDLLRDRCKDYADKLKNWGKNMDYEEFEGKQHGFFTVDPNSEDANKLMLSIKQFIEKHSF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0426 333 Pfam alpha/beta hydrolase fold 85 308 IPR013094 GO:0016787
Lele29g0426 333 PANTHER ARYLACETAMIDE DEACETYLASE 22 310 - -
Lele29g0426 333 Gene3D alpha/beta hydrolase 25 330 IPR029058 -
Lele29g0426 333 SUPERFAMILY alpha/beta-Hydrolases 11 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0426 Lele-ChrLele29 2616007 2617163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0426 1 286 Carbohydrate Esterase AT1G68620 39.175 2.00e-59 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0426 29 2616007 2617163 Lele31g1121 31 17865527 17866683 hybridization
Lele29g0426 29 2616007 2617163 Lele32g0406 32 2576696 2580740 hybridization