Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0425 ATGTACAACGGTATGATGGATCCTGAGATGATAAGAATCGCTCAGGAGCAGGTGAGTCGTATGTCACCTGCCGAGTTTGCTCGGATCCGACAACAGATGATGTCTAATCCAGAGTTAATAAGGACGGTCTCGGAAAGCATGAAGAACATGAGGCCTGAAGACTTAAAACTTGCTGTAGAGCAGTTAAAGCATACTCGTCCTGAACAGATGGCTGAGATTGGTGAGAAAATGGCAAATGCAACACCTGAAGAAATTGCAGCTATGCGTGCCCGTGCTGATGCGCAGGTTAAATATGAATTAAGTGGAGCTGAGATGTTGAAGAAGAAGGGCAATGAACTTCACAGCCAGGGAAGATTCCATGAAGCAATGCAGAAGTATTGTCTTGCCAAGCAAAACATTAGAGAAATTCAATCCTCCCAAAGTAGAAAGCTTATTTTAGCATGCTCGCTCAACTTGATGTCTTGTTACCTGAAGACAGAGCAGTATGACGAATGCGTAAAAGAAGGTTCTGAGGTTTTGGCGTATGATGCAAAAAATCTTAAAGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTTGGTCTACTAAAGGATGCTGTTAATGATTTGAGCATAGCATATGAAGTTTGCCCAGATGATGATACAGTTGCAAATCTTTTAAGGGAGACCAAGGAAATGTTGGCAGAGGGTGGTGGTGACCGTGCCCCTAGAGCTAGAGGATTAACAATTGAAGAAATAACTGAAGACGATCAGAATGTTCCGGCACAGAACATTGGAAGCTCCTCAGTGGAGCAAACAGTGGCTCAGCCAAAAACTATCAACGATTCTTCTAAGAGTTCCAGTACAGCCATCAATGAAAATTTAAAATCAAATATGGAAGGTTTAAATGCGCTGAAAAATGATCCTGAATCTATCAGTTCATTCCAAAATTGCATTTCAAATGCCGACCCTGCCACTCTTGCTTCTTTGAATGCCGGACAATCCAAAGATGTGTCTCCTGATATGACTAGAACTGCCTCAGACATTATTAGCAAGATGTCACCACAGGAACTTCAAAAAATGCTTGACATGGCTTCCTCGTATCAGGGGGACAACCCATATTTAAGAGGATCCCCTGATTCTACTATCAACTCTGGATCAATTCCTCCAAATGTGACTCCTGACATGTTTAAAACAGCTTCTGATATGATAAGTAAAATGCCACCAGAGGATCTTCAGAAGATGTTTGAAATGGCTTCCTCAATGTCTAGGAAAGTATCTAGTTCATCATCTGCAGCTGTGGACAAGAATGTGAGAAATGCTTCTGAGTCAAACATCTCCGCCTCGAATGCTAGTAGAAGTAATGATTTTGCTGAATCAAGTTCTTCTCATGATTCGTTTTTAAATACGAGAAATGTTGCTCAGTCAAACTTCCCATCCTCAAGTACTGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCCATGCGACAGATGTTTACATCAATGATTAAAAATATGAGCCCAGAAATGATGGCAAACACGGGCGAACAGTTAGGTGTTAAGCTTTCAAAAGAAGATGCAGCAAAAGCTCAGCAAGCCATGTCATCCTTGTCAACAGATGACTTCGATAGAATGATGCAATGGGCTGATCGGATTCAAAGAGGAGTTGAAGGTGCGAAGAAGACAAAGAATTGGCTACTAGGAAAACGTGGTATGATATTGGCAATCGTCATGCTCATTTTAGCAGTAATTCTTCACCGGCTGGGTTTCATTGGTCGCTAG 1770 0.4169 MYNGMMDPEMIRIAQEQVSRMSPAEFARIRQQMMSNPELIRTVSESMKNMRPEDLKLAVEQLKHTRPEQMAEIGEKMANATPEEIAAMRARADAQVKYELSGAEMLKKKGNELHSQGRFHEAMQKYCLAKQNIREIQSSQSRKLILACSLNLMSCYLKTEQYDECVKEGSEVLAYDAKNLKALYRRGQAYKELGLLKDAVNDLSIAYEVCPDDDTVANLLRETKEMLAEGGGDRAPRARGLTIEEITEDDQNVPAQNIGSSSVEQTVAQPKTINDSSKSSSTAINENLKSNMEGLNALKNDPESISSFQNCISNADPATLASLNAGQSKDVSPDMTRTASDIISKMSPQELQKMLDMASSYQGDNPYLRGSPDSTINSGSIPPNVTPDMFKTASDMISKMPPEDLQKMFEMASSMSRKVSSSSSAAVDKNVRNASESNISASNASRSNDFAESSSSHDSFLNTRNVAQSNFPSSSTDLQEQMRNQMKDPAMRQMFTSMIKNMSPEMMANTGEQLGVKLSKEDAAKAQQAMSSLSTDDFDRMMQWADRIQRGVEGAKKTKNWLLGKRGMILAIVMLILAVILHRLGFIGR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0425 589 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 365 - -
Lele29g0425 589 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Lele29g0425 589 MobiDBLite consensus disorder prediction 253 282 - -
Lele29g0425 589 SUPERFAMILY TPR-like 101 226 IPR011990 GO:0005515
Lele29g0425 589 MobiDBLite consensus disorder prediction 434 457 - -
Lele29g0425 589 SMART tpr_5 180 213 IPR019734 GO:0005515
Lele29g0425 589 SMART tpr_5 103 136 IPR019734 GO:0005515
Lele29g0425 589 SMART tpr_5 146 179 IPR019734 GO:0005515
Lele29g0425 589 Gene3D Tetratricopeptide repeat domain 89 231 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0425 Lele-ChrLele29 2609078 2614149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0425 107 229 Calmodulin-binding Proteins AT5G48570 34.109 6.98e-13 69.3