Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0420 ATGTGTTGGTTCGCACTTCGCAGTATGGTTTTCTCTCTCCTCAGACAATATGCCTTCCCTTTCAGTGATGAGAAGGAAGGTGTGCGGGCTAATGGAATTCATTTCTTGGCCTTTAATTATGGTTTCCATTCGTGTCAAGTCCTTTTCAACTCTACTGTTTCTTTCTTTTATCATCTTGCCTTGCAGTGTGTCAGATATCTGAGAAACTCTCGTGTTTGTGTTAGTGTTCCCAGCAGCTTACTGACCATAGTGACGGTTAGATGTGGGCATTGTGCTAATTTACTATCAGTTAACATGGGTGCTTCACTTCAAGCGTTTCCTCCTCATCAGACTCACCCTCAGAAACAGCATCTGAATTTTGAAGAACCAAGCAACAAAGATCTGGGATCATCCTCAAAATTCAGCAAGTTAGCTCCATTTGAGCCTATAGAGCATGAGCAGCCTATGATTCCTCCCATTCGCCTTACAGATTTCACTTACCATAAAAGCTTGCTGAGGGAGGAAATCCAAAGGATCAAGGCTAGTAATCCTGACATCAGCCACAGGGAGGCTTTTAGCACAGCAGCAAAAAATTGGGCACATTTCCCTCACATTCACTTTGGACTAAATCTGGATGGGAACAAGCAAGGCGATAAGTTGGACCAGGGAGAGGGAACTCAAAAGTCTAACGAATTCTACTGA 681 0.4347 MCWFALRSMVFSLLRQYAFPFSDEKEGVRANGIHFLAFNYGFHSCQVLFNSTVSFFYHLALQCVRYLRNSRVCVSVPSSLLTIVTVRCGHCANLLSVNMGASLQAFPPHQTHPQKQHLNFEEPSNKDLGSSSKFSKLAPFEPIEHEQPMIPPIRLTDFTYHKSLLREEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLNLDGNKQGDKLDQGEGTQKSNEFY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0420 226 Pfam YABBY protein 72 202 IPR006780 GO:0007275
Lele29g0420 226 PANTHER PROTEIN YABBY 6-RELATED 71 212 IPR006780 GO:0007275
Lele29g0420 226 MobiDBLite consensus disorder prediction 108 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0420 Lele-ChrLele29 2575455 2580807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0420 74 226 C2C2-YABBY Transcription Factor Family AT1G08465 55.828 3.56e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele29g0420 YABBY 2.7e-35 CL0114