Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0415 ATGGGTGTCTCTGGGAAGTGGATTAAAGCTTTGGTTGGTCTAAAGAAATCTGAAAAGGCAGAGTCTTCAGATAAGGATGTAAATAGGATTGGAAACACACGGCACCCAAGGAAACGATCCATTGACATCAACAATGAAAAACTCCAAAATGAGTTTAATCATGCTGCTACTCCTTTTGGAGATGCCAATATCCATTCAGTCACTGATGTCCAACATTCACCTTCCACTTCACAACAAGTACAAGATGCTGCATATAGCCATCAAATTATGAGGGAGGAATGGGCAGCAACACGCATTCAAACAGCATTCCGAGGATTTTTGGCCCGAAGAGCACTACGAGCTTTGAAAGGATTGGTACGGCTTCAGGCCCTGGTAAGAGGTCATGCTGTGAGGAAACAAGCTGCCATAACTCTCCGTTGTATGCAAGCTTTGGTGAGAGTCCAAGCACGTGTTCGAGCAAGGCGTGTTCGAATAGCATTGGAAAGTCAATCAGCACAACAGAAACTTCAGCAACAACTTGCAAATGAAGCCCGTGTTCGGGAAATAGAAGATGGTTGGTGTGACAGTATGGGATCTGTTGAAGAAATTCAAGCCAAATTGTTGAAGAGACAGGAGGCTGCAGCTAAACGAGAGAGAGCAATGGCATATGCTCTGGCACACCAGTGGCAGGCCGCATCAAGGCATCAGGCTGCGTCTTCTGGATTTGAACCAGATAAGAGTGGCTGGGGTTGGAATTGGCTGGAAAGATGGATGGCTGTCCGTCCTTGGGAGAATCGTTTTCTGGACATTAATACAAGGGATGGGGTAATGGTCTGTGAAAATGGAGCAGTGGAGGGTGAAAATGGAATCAGATCTCAATTAACATCTGCTAGCAAGAAATCGGTTCTGCCAAATATTAATCCGAGCCTTACTAGTCAGAAAACCGGGCCATCATTATCTGATGGTTGTGACTCTTCTCCTAGTAAGTCTGCAGGTTTGTTGGAGGCATTTAAAACACAGACTAAGACAAAATCTAATGCAAATGTTGAAATTGAAGAAGCCATCTCAAGACCTGAGTTTGGTTCGAGATCTCATAGTAATCCGAAGGAGAGAGTCCCACAAGCTGATAAACAGGCAAACAAACGATTATCTCTGCCTAACAGTGGGGGAGGCCCTGGGGCTCAAACAGCCAGAAATCCAGCCAGAACAAATGTGAAGGTAGCAATCAGCACTCAAAAAGCTCTTCGTGACAAACCTAAGCTCAATGGAAGAGGGGATGTGAATTCGACAAAAGCTGTTCCTCAACAAGCAGGAATGTAA 1299 0.4503 MGVSGKWIKALVGLKKSEKAESSDKDVNRIGNTRHPRKRSIDINNEKLQNEFNHAATPFGDANIHSVTDVQHSPSTSQQVQDAAYSHQIMREEWAATRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRIALESQSAQQKLQQQLANEARVREIEDGWCDSMGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAASRHQAASSGFEPDKSGWGWNWLERWMAVRPWENRFLDINTRDGVMVCENGAVEGENGIRSQLTSASKKSVLPNINPSLTSQKTGPSLSDGCDSSPSKSAGLLEAFKTQTKTKSNANVEIEEAISRPEFGSRSHSNPKERVPQADKQANKRLSLPNSGGGPGAQTARNPARTNVKVAISTQKALRDKPKLNGRGDVNSTKAVPQQAGM 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0415 432 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Lele29g0415 432 SMART iq_5 91 113 IPR000048 GO:0005515
Lele29g0415 432 SMART iq_5 114 135 IPR000048 GO:0005515
Lele29g0415 432 Gene3D - 93 134 - -
Lele29g0415 432 MobiDBLite consensus disorder prediction 283 343 - -
Lele29g0415 432 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Lele29g0415 432 FunFam IQ-domain 11 91 142 - -
Lele29g0415 432 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Lele29g0415 432 PANTHER IQ-DOMAIN 5-RELATED 1 383 - -
Lele29g0415 432 MobiDBLite consensus disorder prediction 349 370 - -
Lele29g0415 432 MobiDBLite consensus disorder prediction 373 403 - -
Lele29g0415 432 MobiDBLite consensus disorder prediction 283 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0415 Lele-ChrLele29 2535887 2541114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0415 1 417 IQD Protein Family AT3G22190 57.447 1.74e-128 376