Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0411 ATGGATGTTGATTCCTCCTTGGCTCCGGCAAACGATCAGGATCCGGTTATGCAGAACAACAACACAGCTCAGTCTTCTGCGGCAATGGAAAAGGAGCAGCTTGGAGAGCAGCCGGCGTCAGCGGGCGGATCTCCGGCGACTACCCAGTCGCCGATGCAGCAGCAACAGCAGCAGGGGTCTTCTCAGGGGCAGCAGAGTCCGGTTATTGGACCTAGGCTCGCGCCAACTTACTCTGTGGTGAATGCAATTATTGAAAAGAAGGAGGACGGATCAGGGCCTAGGTGTGGCCACACCTTGACTGCCGTCGCAGCTGTTGGAGAGGAAGGTACACCTGGGTACATTGGCCCAAGGCTGATTTTGTTCGGTGGTGCCACTGCACTTGAAGGGAATTCGGCCGCTTCCGGGACTCCTTCTTCGGCAGGAAATGCTGGAATACGTTTAGCTGGTGCCACGGCTGATGTCCATTGTTATGACGTCTTAACTAATAAATGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCAAGGGCTGCTCATGTGGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGCTTGTCAGCAGAAGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGTTGTTCAAGGTCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGATATCTAATGGCTATTGGAGGAAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCCTTGGACACGGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCGCCATGCATGTATGCAACTGCAAGTGCACGCTCTGATGGGCTTCTTTTACTTTGTGGGGGGAGGGATGCCAATAGTGTGCCATTGGCAAGTGCATATGGACTTGCAAAGCATAGGGATGGCCGATGGGAATGGGCAATTGCTCCTGGTGTTTCACCATCTCCACGATATCAGCATGCAGCCGTATTTGTTAATGCAAGGCTACATGTATCTGGAGGGGCTCTTGGTGGAGGACGGATGGTAGAAGACTCGTCGAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTCACTAGTCCAAGGACAGGAAGATACAGCGCGGATGCAGCTGGTGGGGATGCTTCAGTAGAGTTGACCAGGCGTTGTAGGCATGCAGCTGCTGCTGTTGGTGACCTAATTTTTATTTACGGTGGTTTGCGTGGCGGAGTTTTGCTGGATGACCTACTTGTTGCGGAAGATCTTGCTGCTGCTGAAACCACAACTGCTGCTTCACATGCTGCTGCAGCTGCTGCAACTAATTTACAACCAGGATGTATGCCTGGACTATATGGATTTGATGATAGATCAAGGCAAGCAATGCCTGAAGCGGCTGCTGATGGTGCAGTTGTTCTGGGCAATCCCGTTGCTCCCCCTATAAATGGGGACATGTATACTGATATTAGCACTGAAAATGCCATGCTACAGGGATCTAGGCGAACTAGCAAAGGGGTTGAATATCTAGTTGAAGCATCAGCTGCTGAAGCTGAAGCTATCAGTGCCACGTTGGCTGCTGCTAAGGCACGGCAGGTGAATGGAGAAGTTGATTTGCCTGACAGAGATGGTGGGGCTGAGGCTACTCCAAGTGGGAAACCTGTATCATGGATTAAGCCTGATTCTGCATTATCAAATAATATTACTCCTGGTGGAGTTAGACTGCATCATAGAGCTGTGGTTGTTGCTGCTGAGACTGGTGGAGCATTAGGTGGGATGGTTAGACAGCTTTCCATTGATCAGTTTGAAAATGAAGGCAGGCGTGTCAGTTACGGAACTCCAGAAAATGCAACTGCTGCCAGAAAACTATTAGATCGGCAGATGTCTATTAATAGTGTCCCAAAAAAGGTCATAGCACAACTCGTAAAGCCTCGAGGCTGGAAACCACCAGTTCGCCGGCAATTTTTCTTAGACTGCAATGAAATTGCAGATCTTTGTGATAATGCGGAGCGGATATTTTCAAGTGAACCAAGTGTCCTACAACTTAGGGCACCCATTAAAATATTTGGTGATTTACATGGCCAATTTGGGGATCTTATGCGGCTTTTTGATGAGTACGGGGCACCATCAACTGCTGGCGACATAGCATATATCGATTATCTATTCCTAGGAGATTACGTTGACAGAGGCCAACACAGCCTGGAAACTATAACCCTTCTGCTTGCCCTGAAGGTTGAGTATCCAAACAATGTGCATTTGATACGTGGAAACCATGAAGCAGCAGATATTAATGCCCTTTTTGGTTTCCGGATTGAGTGTATTGAAAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGTATAAACCGGTTGTTTAATTGGCTTCCTCTAGCTGCGCTGATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGGTCGATAAATCACGTGGAACAGATTGAGAGCATTCAGCGTCCAATTACAATGGAAGCAGGGTCAATTGTGCTCATGGATTTGTTGTGGTCTGATCCTACAGAGAATGACAGTGTGGAAGGTCTACGACCTAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGACCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGTTTTGAGCGTTTTGCCCAGGGACATCTGATAACACTTTTCTCGGCCACAAACTACTGCGGTACTGCCAATAATGCTGGGGCAATACTAGTTTTGGGTAGAGATCTTGTGGTGGTTCCTAAACTGATTCATCCGTTGCCACCTGCAATTTCTTCACCGGAAGCATCACCAGAACGTCATATTGAAGACACATGGATGCAGGAGTTGAACGCTAACAGACCGCCAACACCAACGAGAGGGCGACCTCCAGTGGCAAATGATCGAGGTTCTCTTGCTTGGATATAG 3018 0.4871 MDVDSSLAPANDQDPVMQNNNTAQSSAAMEKEQLGEQPASAGGSPATTQSPMQQQQQQGSSQGQQSPVIGPRLAPTYSVVNAIIEKKEDGSGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAATNLQPGCMPGLYGFDDRSRQAMPEAAADGAVVLGNPVAPPINGDMYTDISTENAMLQGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVDLPDRDGGAEATPSGKPVSWIKPDSALSNNITPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAQLVKPRGWKPPVRRQFFLDCNEIADLCDNAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIESIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEASPERHIEDTWMQELNANRPPTPTRGRPPVANDRGSLAWI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0411 1005 MobiDBLite consensus disorder prediction 40 71 - -
Lele29g0411 1005 Gene3D - 637 979 IPR029052 -
Lele29g0411 1005 FunFam Serine/threonine-protein phosphatase 73 270 - -
Lele29g0411 1005 SMART pp2a_7 674 958 IPR006186 GO:0016787
Lele29g0411 1005 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Lele29g0411 1005 MobiDBLite consensus disorder prediction 981 1005 - -
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Lele29g0411 1005 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Lele29g0411 1005 MobiDBLite consensus disorder prediction 11 31 - -
Lele29g0411 1005 Pfam Galactose oxidase, central domain 229 282 - -
Lele29g0411 1005 CDD MPP_Bsu1_C 654 956 IPR041758 -
Lele29g0411 1005 SUPERFAMILY Metallo-dependent phosphatases 661 964 IPR029052 -
Lele29g0411 1005 Gene3D - 201 458 IPR015915 GO:0005515
Lele29g0411 1005 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Lele29g0411 1005 FunFam Serine/threonine-protein phosphatase 274 473 - -
Lele29g0411 1005 SUPERFAMILY Kelch motif 149 438 IPR015915 GO:0005515
Lele29g0411 1005 MobiDBLite consensus disorder prediction 1 71 - -
Lele29g0411 1005 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Lele29g0411 1005 Gene3D - 75 200 IPR015915 GO:0005515
Lele29g0411 1005 MobiDBLite consensus disorder prediction 554 574 - -
Lele29g0411 1005 Pfam Kelch motif 335 381 IPR011498 GO:0005515
Lele29g0411 1005 PIRSF STPPP_BSU1 41 1005 IPR012391 GO:0004721|GO:0009742
Lele29g0411 1005 FunFam Serine/threonine-protein phosphatase 638 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0411 Lele-ChrLele29 2509101 2518317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0411 666 901 Calmodulin-binding Proteins AT5G63870 29.044 7.32e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1035 11 17538916 17541568 Lele29g0411 29 2509101 2518317 CCT
Lele12g0291 12 2610717 2614329 Lele29g0411 29 2509101 2518317 CCT
Lele29g0411 29 2509101 2518317 Lele31g1134 31 17965176 17974785 hybridization
Lele29g0411 29 2509101 2518317 Lele32g0390 32 2462757 2471695 hybridization