Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0404 ATGGCCTGCCGGACACTGATCGTTGGAAACTTGGATCCAGAGAGAAAGAGAAGTGGCGGACTGAGGACTAAACAGGCGGGAAGAGGATCTGTTAATCCATTATTAGTTCGGGAGAAAAAAAACTTTTTTGCGCTTTTTTATCCCGTCGTTGAAACGATGGGGTTGTTGTTGAAAGAAGCCTTGAAGACTCTGTGCTGCCGGAATCAATGGTCTTATGCTGTGTTCTGGAAGATCGGCTGCCGCAATCCTAAGCTGTTAATATGGGAAGAATGCTATTATGAACCCTTGCCTTGTACCTTTCCTCCAAACATTGATAGAACTGGGACGTCTAACTTATCCTTCGGAGGTGTGGAAAGCGATAGATTATGTTCTTTGATTAACAGAATGATGGTGAATAATTCAGTCAATATTGCTGGAGAAGGGATAATCGGGCGGGCAGCGTTCACGGGAAACCATCAATGGATTCTTTTGAACAATTTTACTAGTGTTGCATATCCACCAGAGGTATACAATGAAGTGCATCATCAATTTTTGGCTGGAATGCAGACCATAGTGGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGGCAATAATGGAGGATGTTGGATTTGTGAATGATGTAAGGAGTTTAATCTTTCAATTGGGATGTGTTCCTGGGGTTCTTCTATCCGAAGATTATTCATCAAAAGTTTCTGCCCAAGGTCTTAGTGCAATTGTTACTGTTGGGGTACCTGCGTCAGTAGATCTGCCAGTTGTTTCCTCAAATTGCAGCCCCTCTATGGATAGTGGCTCCAACCAAATAAATTCATCTCACACTTCAAACTCCGTTGTTCACCAATCTCTACAACAAAGGGAAGAGATGAATGATGACCAGGTTTCTGTATTGACCCATCAAACCCCTAATATTACTCAGATGCTGTCCAAGTACCATGTTAACCTTTGCCAACCTAAGGCAATTCCAATAGAAAAACTAAACTTTACTGCCCCATCAGATAATAGAGTTGTGGAGGCACAAGTGATACCCTCAAATCTTAAATCATGTCCCCAACAACCTTCTGTTTTGTGTGATTCAAGATCTGCATTCAATGAATTGAATGAGATTGGTCAATCAAGGCTGAGTGACTGCAGCATGAAGTTTAATGAACAACAAACTGTAAACAGTAGTGGGAGTCAGAATTATGGCAATTCTCTTATAAATGCACCAAGTAATTTTTGCATGACTCAAATCAAGACAAACAAAGGCCATATGCCTGATCATGGTCAAAATTCTGTTAGTACTCAATTACTTGGAGGAATACCGATTCAGGGTGGATTGAGTAGCCTGTTGAGGTCAAGTTTGATTAACACCTGTGTCTCAGAACCTCCCAAAGTTGGTGCTGCTGATTTTTCTGGAACACATAAAGTTCGGAGTGGATTTCAAAATGATGATTCAACTAAAGCAGGGGCTTTTTCTTTCCCTTATGTGACAAATCAATTAGACACTTGTCACAGGCCTCTGGAAAACTCTGATCAGAAGAATCTTCCCCTTGATTTAAAGTGTGCTCTTGACAAGTTGGGTCCAAATGATCAAATGATAGATGGTGATTTGCTTCAGGCCCTTAAGATACCTTCTCTTTATCTTGAGGAGCATGTGCCTATGGGTGATCAAATGATGGGTTTCTTCAATGGTTCTCTCAATAGTGATGTCACGAGTCAATCTTTCACAAAACAAGAAGCTTATGCTCAATCTTCATCAGGAGATGACCTGTTTGATGTTTTAGGTGTGGATTTTAAGAGCAAAATACTGAATGAAAACTGGAATAAATTGCTTCCTGACGAATCAGATGTTAATGCGAGAGTCCTGGACAAAAAGGCGTCTGTGAATATGCAGAGCTTAGATGCTGATTGCTATTCAGTTAATGAGACTGTGTCAGATAGTGGCGTTTTCTCTGGGAGGGGCACTGATCACCTTTTGGATGCTGTGGTATCAAGAGCTCAATCTGCTGTGAAACAGGATTCTGATGATACATCTTGCAGGACAGCAGTGACTAGGATCAGCAATGCCTCTGTTCCCTCTTCTTCCCATAAGCAGGTTATGTCAGATCATGCCGTTAGTGGATTGTTGAACTTTCCCAAGACTGAGGGTAAATCAAGTGCTGCAGAAACTTGTTCTCTTCGGTCTGGATGTCACAATGATGATGCTGGAAACTGTTCTCAAACTACTTCCATTTATGGGTCTCAACTCAGTTCGTGGGTTGAGAATGTTAGCAATGTGAAGCGTGAAAACAGTGTTTCGACTGGTTACTCTAAGCGACCAGATGAAGTTGGCAAATCAAATCGCAAAAGGCTTAAACCTGGAGAGAATCCAAGACCCCGACCTAAAGATCGCCAAATGATTCAAGACCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGTGCAAAATGTAGCATTGATGCTCTTCTTGAACGGACCATAAAGCACATGCTTTTCTTACAAAGTGTAACAAAGCATGCTGACAAGGTGAAACAAACTGGGGATTCCAAGATTATTAACAAGGAAGGTGGGCTGCTTCTAAAAGATAATTTTGAAGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTTAATCCGCCTCGTCAGATGTTAGTGGAGATGCTTTGTGAAGAACGGGGTTTCTTTCTGGAGATAGCTGATTTGATCAGGGGAATGGGTTTGACAATTTTAAAGGGTGTAATGGAAGCTCAAAATGATAAGATCTGGGCACGCTTTGCTGTGGAGGCGAATCGGGATGTGACGAGGATGGAAATATTTATGTCACTTGTTCATCTTCTGGAACAAACAGCGAAGGGTGGCGCAGCAGCATCTACATCAAACGAAATGAACAACATGATGGTTTATCACTCCTTCCCACAACCTACTCAGATAGCAGCAACTGGGATACCTAGGAGTTTGCAATGA 2991 0.4206 MACRTLIVGNLDPERKRSGGLRTKQAGRGSVNPLLVREKKNFFALFYPVVETMGLLLKEALKTLCCRNQWSYAVFWKIGCRNPKLLIWEECYYEPLPCTFPPNIDRTGTSNLSFGGVESDRLCSLINRMMVNNSVNIAGEGIIGRAAFTGNHQWILLNNFTSVAYPPEVYNEVHHQFLAGMQTIVVIPVLPHGVVQLGSFLAIMEDVGFVNDVRSLIFQLGCVPGVLLSEDYSSKVSAQGLSAIVTVGVPASVDLPVVSSNCSPSMDSGSNQINSSHTSNSVVHQSLQQREEMNDDQVSVLTHQTPNITQMLSKYHVNLCQPKAIPIEKLNFTAPSDNRVVEAQVIPSNLKSCPQQPSVLCDSRSAFNELNEIGQSRLSDCSMKFNEQQTVNSSGSQNYGNSLINAPSNFCMTQIKTNKGHMPDHGQNSVSTQLLGGIPIQGGLSSLLRSSLINTCVSEPPKVGAADFSGTHKVRSGFQNDDSTKAGAFSFPYVTNQLDTCHRPLENSDQKNLPLDLKCALDKLGPNDQMIDGDLLQALKIPSLYLEEHVPMGDQMMGFFNGSLNSDVTSQSFTKQEAYAQSSSGDDLFDVLGVDFKSKILNENWNKLLPDESDVNARVLDKKASVNMQSLDADCYSVNETVSDSGVFSGRGTDHLLDAVVSRAQSAVKQDSDDTSCRTAVTRISNASVPSSSHKQVMSDHAVSGLLNFPKTEGKSSAAETCSLRSGCHNDDAGNCSQTTSIYGSQLSSWVENVSNVKRENSVSTGYSKRPDEVGKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKVKQTGDSKIINKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGMGLTILKGVMEAQNDKIWARFAVEANRDVTRMEIFMSLVHLLEQTAKGGAAASTSNEMNNMMVYHSFPQPTQIAATGIPRSLQ 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0404 996 MobiDBLite consensus disorder prediction 266 289 - -
Lele29g0404 996 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 57 216 IPR025610 -
Lele29g0404 996 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 53 990 IPR043561 GO:0003700|GO:0006355
Lele29g0404 996 CDD bHLH_AtLHW_like 786 855 - -
Lele29g0404 996 MobiDBLite consensus disorder prediction 772 795 - -
Lele29g0404 996 MobiDBLite consensus disorder prediction 759 795 - -
Lele29g0404 996 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 782 831 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0404 Lele-ChrLele29 2443016 2448690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0404 581 967 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 54.061 5.12e-120 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1039 11 17576480 17591225 Lele29g0404 29 2443016 2448690 CCT
Lele09g1039 09 19568285 19571390 Lele29g0404 29 2443016 2448690 CCT
Lele10g0991 10 21275510 21279173 Lele29g0404 29 2443016 2448690 CCT
Lele29g0404 29 2443016 2448690 Lele31g1139 31 18036311 18041910 hybridization
Lele29g0404 29 2443016 2448690 Lele32g0385 32 2386235 2391359 hybridization