Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0402 ATGGGAATTATCCGTACAAAATTCTGCATTTTCCTCATATTTTGCCCGATTGTAGTGGTGTATGGTGCCACAGACCCAAATGATCTCAAAATTCTGAATGATTTCAAAAAAGGTTTGGAGAATCCAGAGCTTCTTAAGTGGCCAGACGATGGGGATGATCCTTGTGGTCCTCCTTCATGGCCTTACGTGTTCTGTGCTGGTAACAGAGTCACACAGATTCAGGCCAAGTATCTGGGTCTTAAAGGAACATTACCTCCATCCTTGAACCAGCTCTCAGAACTCTACAACTTGGGTCTTCAACACAACAAGCTTAGTGGGATGCTGCCTACTTTTAGTGGGTTATCCAAATTGGAATTCGCTTTCTTAAATGACAATCAATTTGATGGAATCCCAACTGATTTCTTTGATGGTCTTACCAGTATTCGCGATTTAGCTTTGGCAGAAAATCCATTGAATGCGAGTACTGGGTGGTCTCTTCCTGCGAGTTTAAAAGACTCAGCACAATTAACGAATCTTTCTCTTGTGCATTGTAATTTGGTCGGACCAGTACCTGATTTTTTGGGGACATTGCCTTCTCTCTCAAATTTGTTGCTTTCATACAACCGATTGTCTGGTAGTATTCCGAGCAGCTTTGGTGAGTCTACTATGCAGGTTTTGTGGTTGAATAACCAAGATGGTGGTGGGATGACTGGTCCAATTGATGTTATTGCTTCAATGACTTCTCTAACGCAGCTTTGGCTTCATGGAAATCAGTTCACTGGGACAATTCCGAAGAGTATTGGAAATCTAACTTCCTTGATGGATATCAACCTCAATAGTAATCAACTTGTTGGTTTGATTCCTGAAGGTCTGGCCAATATGGAACTTCAGAATTTGGTGTTAAACAATAACAGGCTCATGGGTCCTATACCGAAGTTTAAGGCTAGAAATGTTTCTTATGCTTTCAATTTCTTTTGTCAACAGAAGCCTGCAGCCGAATGCGCCCCTGAGGTTACTGCTCTGCTTGATTTTCTTAGTAATATAAATTACCCTTCTATGCTCGCTGTTCAATGGTCTGGTAATGAACCATGTACTGGGCCATGGTTGGGATTGAGCTGCAATCCCAAGTCAGAGGTATCGATTATTAACTTCCCCCACCACAGGGTCAATGGTACTCTGAGCCCCTCACTTGCTAAGTTGGCTTCACTCCATGAGATCAGGCTTGGAGGGAATAATTTAACTGGCCAAATTCCTAGCAGTTTCACTGAATTGAAATCTTTGAAGCTGTTGGATTTAAGTGATAATAATCTCGAGCCCCCATTGCCAAATTTTCGTGGTGTGAAGCTTGTTCTTGATGGCAACCCTCTTTTTTCCAACCAAACAGGAAGAAGTCCCCAGCCTATCAGCAGCCCACCACCTTCAAGTTCACAATCTTCACCTCACAACCCATATCCATCCTCTGAAAGCCCACCTTCCTCAAGTCACAGTTCAAGCTCAAATCCATCAAGGTCGGGACAAGTAGAATCACAAGATGATAAATCTAGAAGATTCAGAACACTAGCAATAGTGGCTGGAGCTTCAATTTTCGCCATTGCAGCTATTTTGGTTATTTTCCTTTCCATATATTGCTCAAATAATAAGAAGAAGAAAACCTTATTGGATGATTCTAGTTCCATTGTGGTTCACCCTCGAGACCCATCCAATCCAGATGTGGTTAAAATTGCCGTAGCAAGCAACACTGCTGGAAGCTTATCGTCTAATACTGGGACTAGTTCTTTGAGAAACATTAGTGGTGAATCTGAAAGCTCTCATCTGATTGATGCTGGTAGTCTTGCCATCTCTGTTCAAGTTCTACGTAAGGTTACCAAGAACTTTTCTCCAGAAAATGAGTTAGGCCATGGTGGGTTTGGGACTGTCTATAAAGGTGAACTAGAAGATGGGACAAAAATAGCAGTGAAGAGAATGGAGAGCGGAGCTATGAGCAGGAAAGCACTGCATGAGTTCCAGGCGGAAATAGCTGTTCTTTCTAAGGTTCGTCACCGACATTTAGTATCTCTGTTGGGATACTCCATTGAAGGCAATGAAAGACTTTTGGTCTATGAATATATGCCTCTGGGTGCTCTAAGCAAGCATCTTTTTCATTGGAAAAGCCTGAAATTGGAGCCTTTGACTTGGTCGCAAAGGCTTGTGATAGCACTAGATGTTGCTAGAGGAATGGAATACCTCCATGGTCTTGCCCGCCAGACCTTCATCCACCGAGACCTCAAGCCTTCGAATATTCTTCTTGATGAAGATTTACGAGCAAAAATTTCAGATTTTGGCCTGGTGAAACTTGCCCCAGGTGGTGAGAAGTCTGTGGTAACTACGCTTGCTGGTACATTTGGATATCTTGCCCCTGAATATGCAGCTTCAGTGATGGGGAAAATCACCACGAAGGTTGATGTGTTCAGCTATGGTGTGGTGTTGATGGAACTTCTAACTGGACTGATGGCTCTTGATGAGAGCCGGCCAGAGGAGAGCCGATACCTAGCTCAGTGGTTTTGGCAGATTAAATCAAGCAAAGAAAAGCTTATGGTTGCCATTGATCCTGCTCTTCAGCCAACTGAAGAGATTTATGAAAGCATCTCCATTATAACCGAACTTGCTGGACATTGCACTGCTAGGGAACCAAACCACCGACCAGATATGAGTCATGCGGTGAATGTATTGTCAGCATTAGTAGAGAAATGGGTACCGATCGACGATGAATTGGATTGTTTTACCGGCATTGACTTTGGACGACCACTTTCCCAGATGTTGAAGGATTGGAAGGAAGCAGGGAGCAGAGATGTTAGCTGTGCTAGCCTTGAAGACAGCAAAGGCAGCATACCTGCAAAGCCTGTTGGGTTTGCAGACTCCTTTTCTTCCGCCGATGTTCGATAA 2901 0.4343 MGIIRTKFCIFLIFCPIVVVYGATDPNDLKILNDFKKGLENPELLKWPDDGDDPCGPPSWPYVFCAGNRVTQIQAKYLGLKGTLPPSLNQLSELYNLGLQHNKLSGMLPTFSGLSKLEFAFLNDNQFDGIPTDFFDGLTSIRDLALAENPLNASTGWSLPASLKDSAQLTNLSLVHCNLVGPVPDFLGTLPSLSNLLLSYNRLSGSIPSSFGESTMQVLWLNNQDGGGMTGPIDVIASMTSLTQLWLHGNQFTGTIPKSIGNLTSLMDINLNSNQLVGLIPEGLANMELQNLVLNNNRLMGPIPKFKARNVSYAFNFFCQQKPAAECAPEVTALLDFLSNINYPSMLAVQWSGNEPCTGPWLGLSCNPKSEVSIINFPHHRVNGTLSPSLAKLASLHEIRLGGNNLTGQIPSSFTELKSLKLLDLSDNNLEPPLPNFRGVKLVLDGNPLFSNQTGRSPQPISSPPPSSSQSSPHNPYPSSESPPSSSHSSSSNPSRSGQVESQDDKSRRFRTLAIVAGASIFAIAAILVIFLSIYCSNNKKKKTLLDDSSSIVVHPRDPSNPDVVKIAVASNTAGSLSSNTGTSSLRNISGESESSHLIDAGSLAISVQVLRKVTKNFSPENELGHGGFGTVYKGELEDGTKIAVKRMESGAMSRKALHEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSKHLFHWKSLKLEPLTWSQRLVIALDVARGMEYLHGLARQTFIHRDLKPSNILLDEDLRAKISDFGLVKLAPGGEKSVVTTLAGTFGYLAPEYAASVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAQWFWQIKSSKEKLMVAIDPALQPTEEIYESISIITELAGHCTAREPNHRPDMSHAVNVLSALVEKWVPIDDELDCFTGIDFGRPLSQMLKDWKEAGSRDVSCASLEDSKGSIPAKPVGFADSFSSADVR 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0402 966 SUPERFAMILY Protein kinase-like (PK-like) 599 896 IPR011009 -
Lele29g0402 966 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Lele29g0402 966 SUPERFAMILY L domain-like 24 306 - -
Lele29g0402 966 Pfam Leucine rich repeat N-terminal domain 329 367 IPR013210 -
Lele29g0402 966 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lele29g0402 966 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Lele29g0402 966 FunFam Receptor-like kinase TMK4 26 324 - -
Lele29g0402 966 CDD STKc_IRAK 624 896 - -
Lele29g0402 966 SMART serkin_6 618 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0402 966 Gene3D Ribonuclease Inhibitor 26 324 IPR032675 -
Lele29g0402 966 MobiDBLite consensus disorder prediction 481 500 - -
Lele29g0402 966 SMART LRR_typ_2 114 137 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 263 286 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 91 113 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 393 416 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 417 439 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 239 262 IPR003591 -
Lele29g0402 966 SMART LRR_typ_2 190 214 IPR003591 -
Lele29g0402 966 MobiDBLite consensus disorder prediction 943 966 - -
Lele29g0402 966 FunFam PTI1-like tyrosine-protein kinase 3 696 910 - -
Lele29g0402 966 Gene3D Transferase(Phosphotransferase) domain 1 696 909 - -
Lele29g0402 966 SUPERFAMILY L domain-like 328 439 - -
Lele29g0402 966 Gene3D Phosphorylase Kinase; domain 1 579 695 - -
Lele29g0402 966 MobiDBLite consensus disorder prediction 448 507 - -
Lele29g0402 966 ProSiteProfiles Protein kinase domain profile. 618 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0402 966 Pfam Protein kinase domain 621 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0402 966 FunFam receptor protein kinase TMK1 580 695 - -
Lele29g0402 966 PANTHER OSJNBA0070M12.3 PROTEIN 9 966 - -
Lele29g0402 966 MobiDBLite consensus disorder prediction 459 480 - -
Lele29g0402 966 FunFam Leucine-rich repeat receptor-like kinase 329 453 - -
Lele29g0402 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 743 755 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0402 Lele-ChrLele29 2426312 2429670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0402 88 914 Receptor kinase-like Gene Family AT1G55610 30.257 1.09e-82 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lele29g0402 Pkinase 2.2e-47 CL0016