Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0396 ATGTCTTCCCACAAGAGAACTATTGTCAGAATACTCCTCACTGCAAATGGAAGCTGTGGCTGTGGCAGGCCCAAGCCCACCGACGTCTTGGAGCCCCAGCCCAGGCGCCCTAACCCAAACCCAATCGCCAGCTTCCAATGTTCCACCCCCACCTCCGCCGACCGAAATTCCGTCCATTCTGTCGACGAAGACGACGGAGATATCACCTCCACCACCGTGCCTGAAGCCGAGACGGAGGCTCGGAGGAGCTGGAAGAATGGGAGTAATTACATGTTGCCGAAGCAGAGTCCGATCGTGGACAGCGTGGCGGTGGAGAAGGAGTCGGAGGATCCGTACAAGGATTTCCGGCACTCGATGCTGCAGATGATATTCGAGAAGGAGATGTGCTCGGAATCTGATCTGGAGGAGCTTGTGGAAGCGTTCCTTCAACTGAACTCACCGAGACAGCACGACGTGATCATGAAGGCCTTCACGGAAATCTGCAAGGAGGCTTTCCCCAGTGATAACAGTAAGAAGCACGTGAGGAAGGGGCCATTGGCACGTGCGTAG 549 0.5574 MSSHKRTIVRILLTANGSCGCGRPKPTDVLEPQPRRPNPNPIASFQCSTPTSADRNSVHSVDEDDGDITSTTVPEAETEARRSWKNGSNYMLPKQSPIVDSVAVEKESEDPYKDFRHSMLQMIFEKEMCSESDLEELVEAFLQLNSPRQHDVIMKAFTEICKEAFPSDNSKKHVRKGPLARA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0396 182 Pfam Transcriptional repressor, ovate 108 163 IPR006458 -
Lele29g0396 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 65 165 IPR038933 GO:0045892
Lele29g0396 182 ProSiteProfiles OVATE domain profile. 104 163 IPR006458 -
Lele29g0396 182 MobiDBLite consensus disorder prediction 20 91 - -
Lele29g0396 182 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 102 161 IPR006458 -
Lele29g0396 182 MobiDBLite consensus disorder prediction 71 91 - -
Lele29g0396 182 MobiDBLite consensus disorder prediction 40 56 - -
Lele29g0396 182 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0396 Lele-ChrLele29 2372233 2372781 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele29g0396 Ovate 3.5e-21 No_clan