Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0373 ATGTATAACCCAATGGAGGCGCCTTACCCTGGTTTTCGCTTCTACCCTACAGAAGAAGAGCTCGTCTCCTTCTACCTCCATAACAAGCTCCAAGGTCTCAGACCCGACATGGACATAGTCATTCCCGTTGTTCAAATCCACAACGTCGAGCCTTGGAACCTCCCACAGCTCGCTGGAGAGGTTTGTCGTGGCGATACAGAGCAGTGGTTCTTCTTCTCGCCGAGGCAAGAAAGAGAAGTCAGAGGAGGTAGGCCCAACAGAACCACTGCTTCCGGATACTGGAAAGCCACCGGTTCTCCTAGTTACGTTTACTCCTCTGATAACAGAATGATCGGCGTGAAGAAAACGATGGTGTTTTACAGAGGCAAAGCTCCGACTGGAAGGAAAACCAAGTGGAAGATGCATGAATACAAAGCCATTGAACCCTCCGACTCTAACCAATCTGCCGCCTTCATTCCCACGTTGAGGCAAGAATTCAGCTTGTGCCGAGTTTATGTGATATCGGGGAGCTTCAGAGCATTTGATAGACGGCCATTCGAGGCGGCGGGGTTTCAAGGTGACGGAGCTTCTGGTTCTGGTGCTGCGACTGGTATTCGCGGCGAAGGTGGAAGAGGGGTCGATAGAGGAAACTCGTCGGACACTTCAAACTCAGGAGCTGAGCATGCAGAAGCGGGAGGATCCAGCAGTACAATTCGGAATGTGAATGATGAGACTGTTCAAGAGCCTCTATGGGAATGGGAACAACTTAATTGGCCCTAA 759 0.5086 MYNPMEAPYPGFRFYPTEEELVSFYLHNKLQGLRPDMDIVIPVVQIHNVEPWNLPQLAGEVCRGDTEQWFFFSPRQEREVRGGRPNRTTASGYWKATGSPSYVYSSDNRMIGVKKTMVFYRGKAPTGRKTKWKMHEYKAIEPSDSNQSAAFIPTLRQEFSLCRVYVISGSFRAFDRRPFEAAGFQGDGASGSGAATGIRGEGGRGVDRGNSSDTSNSGAEHAEAGGSSSTIRNVNDETVQEPLWEWEQLNWP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0373 252 MobiDBLite consensus disorder prediction 208 237 - -
Lele29g0373 252 MobiDBLite consensus disorder prediction 183 252 - -
Lele29g0373 252 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
Lele29g0373 252 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 190 - -
Lele29g0373 252 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Lele29g0373 252 SUPERFAMILY NAC domain 7 165 IPR036093 GO:0003677|GO:0006355
Lele29g0373 252 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0373 Lele-ChrLele29 2282447 2283394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0373 11 252 NAC Transcription Factor Family AT5G22380 57.377 2.25e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g0373 NAM 6.4e-33 No_clan