Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0367 ATGGACTTTAAGTCTCGCAAGGACAGTGAGGACTCTGAGAAACCTGAAAACCAAGTGCCCGTGGAATTCATTAAAGAAACTGAAACTGAACAAGAAGCTGAAAAGAATATTCAAAAGTATAGTCCACCCAGAAACGTTGATGATCAGGTGGAAGCCACTATGAGGAAGGCCAGAGTTTCGATTACTGTTGGATGTCAATGGAGAAAATATAGGCAGAAGTTGGCCAAAGGGAATCCATGCCCTCGAGCTTATTATCGCTGCACCATGGGGACAGGTTGTCCTGTTAAGAAACGGGAATTCATCTATCCAAATTCTTTTTAA 321 0.4237 MDFKSRKDSEDSEKPENQVPVEFIKETETEQEAEKNIQKYSPPRNVDDQVEATMRKARVSITVGCQWRKYRQKLAKGNPCPRAYYRCTMGTGCPVKKREFIYPNSF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0367 106 MobiDBLite consensus disorder prediction 1 21 - -
Lele29g0367 106 Pfam WRKY DNA -binding domain 64 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele29g0367 106 SUPERFAMILY WRKY DNA-binding domain 63 98 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele29g0367 106 Gene3D WRKY domain 49 100 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele29g0367 106 ProSiteProfiles WRKY domain profile. 66 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele29g0367 106 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 97 IPR044810 GO:0003700
Lele29g0367 106 SMART WRKY_cls 61 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0367 Lele-ChrLele29 2259583 2260042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0367 25 98 WRKY Transcription Factor Family AT1G62300 58.824 2.80e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele29g0367 WRKY 1.3e-11 CL0274