Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0349 ATGGCGGAAGAACATAGATGCCAAGCTCCGCGCCTCTGCGCCAACAACTGCGGCTTCTTCGGCAGTCCTGCGACTCAGAATCTATGTTCCAAATGCTACAGGGATTTGCAGCTCAGGGAGCGACAGTCCTCTTCGGCCAAGCTGGTTCTCAATCAATCTATAGTGCCTCAGGCGTCCACGGCGGAGAAATTGGAATCATCTTCGTCATTGCTGGAACCGGTTGAGGATCTTTCGTCTCCGGTTGTTGCGGCGGTCGATCCAGCGCTTCCGGTGGAGGAGCCGAAGAGCGCTTCACCGGCTCAGCCGAATAGGTGCATGACGTGCAGGCGGCGCGTGGGGCTCACGGGGTTCAATTGCCGGTGCGGGTTGACGTACTGTGGGGCACACCGGTACCCGGAACAGCACGGGTGCGAGTTCGACTTCAAGACGATGGGCCGGGAGCAGATCGCGAAGGCCAATCCAATAGTGAAGGCCGATAAACTCGAAAAGATCTGA 495 0.5778 MAEEHRCQAPRLCANNCGFFGSPATQNLCSKCYRDLQLRERQSSSAKLVLNQSIVPQASTAEKLESSSSLLEPVEDLSSPVVAAVDPALPVEEPKSASPAQPNRCMTCRRRVGLTGFNCRCGLTYCGAHRYPEQHGCEFDFKTMGREQIAKANPIVKADKLEKI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0349 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 57 - -
Lele29g0349 164 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Lele29g0349 164 Gene3D - 1 69 - -
Lele29g0349 164 ProSiteProfiles Zinc finger AN1-type profile. 99 145 IPR000058 GO:0008270
Lele29g0349 164 SUPERFAMILY AN1-like Zinc finger 91 159 IPR035896 -
Lele29g0349 164 Gene3D - 80 160 IPR035896 -
Lele29g0349 164 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Lele29g0349 164 SMART AN1_Zf_4 105 142 IPR000058 GO:0008270
Lele29g0349 164 Pfam AN1-like Zinc finger 105 141 IPR000058 GO:0008270
Lele29g0349 164 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 164 - -
Lele29g0349 164 FunFam Zinc finger AN1-type containing 6 81 160 - -
Lele29g0349 164 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0349 Lele-ChrLele29 2141249 2141743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0349 1 164 C2H2 Transcription Factor Family AT3G52800 53.179 1.38e-49 155