Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0340 ATGTTCCGATCTGGGTGTTGGGCAGAGATGAAGGTGATTGCTGCGTATTTGCTGGCAGTGTTGGGAGGGAACACATCCCCTTCCGCGGATGATATAAAGAATATCCTTGGCTCAGTTGGAGCTGAGGCTGATGATGATAGAATTGAGCTTCTCTTAAAGGAAGTTAATGGCAAAGATATTACTGAATTGATTGCTGCTGGAAGAGAGAAGCTGGCATCAGTTCCAGGTGGCGGAGGTGCAGTTGCTGCTGTTGCTGCACCTGCCGGTGGAGGTGCAGCTGGCGGAGCTGCACCTGCTGCAGAGGCTAAGGAGGAAAAGAAGGTGGAAGAGAAAGAGGAGTCTGATGATGACATGGGTTTCAGCTTATTCGACTAG 375 0.5013 MFRSGCWAEMKVIAAYLLAVLGGNTSPSADDIKNILGSVGAEADDDRIELLLKEVNGKDITELIAAGREKLASVPGGGGAVAAVAAPAGGGAAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0340 124 MobiDBLite consensus disorder prediction 89 124 - -
Lele29g0340 124 Pfam 60s Acidic ribosomal protein 26 123 - -
Lele29g0340 124 Gene3D - 9 68 IPR038716 -
Lele29g0340 124 FunFam 60S acidic ribosomal protein P2 8 68 - -
Lele29g0340 124 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 10 124 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele29g0340 124 CDD Ribosomal_P2 10 124 IPR044076 GO:0002182|GO:0003735|GO:0022625
Lele29g0340 124 MobiDBLite consensus disorder prediction 100 114 - -
Lele29g0340 124 Hamap 50S ribosomal protein L12 [rpl12]. 11 124 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0340 Lele-ChrLele29 2056458 2057853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0340 10 124 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 67.826 5.81e-34 112