Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0319 ATGGCAAGTACGGCCGACCTTAACGGCCCCTCTTTTGTTTCGGGAGCTGTTGGAGTCCAGAACTCCGCTGTCGGAGGAAATTCCGGGGCTAGCGGCTCGGAGGTTGGGTTGAAGAGGGGAAGGGGAAGGCCCCGGAAGTATGATGGAAACCTTCCGTCTCCAAAATCGACGCCGTCGGGAGTTTCAACCTCTCCTTCTTCTAAGAGAGGCAGAGGAAGGCCACGTGGCTCTGGAAAGTTGCAGATTTTAGCTTCAATGGGAGGAATGTTTTCAGCCACAGCTGGAGGAAGCTTTATCCCTCATGTAGTGATTGTGAATCCCGGAGAGGATGTTGTGAATAGCATCTCATCATTTTGTCATAAAGGCCGTCTTGCTCTTTGCATTCTCTCTGCGATTGGTGCTGTGTCTGTTGTTGACATTCAGCAACCTGGTTCTTCTGGTCGTTGTTGTTTGAGACATGAGGGTCTCTTTGAGATAATAACTTTATCTGGATCATATACCTATGGTGGAATCAGTGGTGGTACACATCAGAAAGCTCTCACCATGAGAGTATCACTAGCTCAACCCGATGGGAAGATTTTCGGAGGTAATGTTGGGGGCTCACTGATAGCGGCTGGCCCTATTCAACTAATTCTGGGCACTTTTAAGCAAAACATCAGTAGTGAAATTAAAAGGCGGCTGCCACCTGGATCTTCTGATGCTGCTGCCGACACGCCTGGTGAGTCAGATTCGGTGAGGCTTTCCTTACAAGTTCCTAAATTGATAGAAGCTGAACAGAGTTTTCCTTCACCAACATCTGGACTTATGCCAACATCTAATGGATTTCCTGACAATGTCATGCCTAGAACAGCTAATGGATTACCAAACAATGTCACTGCTACGAAAACCAATGGTAATGGATTACCAGATTTCTTTTCTCCGAATCAGAACGTGCACTCGACCTCGTTGAATGGTGCTAGCCTTGACTTTCAGGGTCGTGTTTATGTAGGGGCTGACTTAGAACTTAGTGGTTTTCTTTTAGTCTAG 1026 0.4717 MASTADLNGPSFVSGAVGVQNSAVGGNSGASGSEVGLKRGRGRPRKYDGNLPSPKSTPSGVSTSPSSKRGRGRPRGSGKLQILASMGGMFSATAGGSFIPHVVIVNPGEDVVNSISSFCHKGRLALCILSAIGAVSVVDIQQPGSSGRCCLRHEGLFEIITLSGSYTYGGISGGTHQKALTMRVSLAQPDGKIFGGNVGGSLIAAGPIQLILGTFKQNISSEIKRRLPPGSSDAAADTPGESDSVRLSLQVPKLIEAEQSFPSPTSGLMPTSNGFPDNVMPRTANGLPNNVTATKTNGNGLPDFFSPNQNVHSTSLNGASLDFQGRVYVGADLELSGFLLV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0319 341 MobiDBLite consensus disorder prediction 1 29 - -
Lele29g0319 341 Gene3D - 100 229 - -
Lele29g0319 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 265 IPR039605 GO:0003680
Lele29g0319 341 MobiDBLite consensus disorder prediction 1 78 - -
Lele29g0319 341 CDD DUF296 100 215 IPR005175 -
Lele29g0319 341 PRINTS AT-hook-like domain signature 66 77 IPR017956 GO:0003677
Lele29g0319 341 PRINTS AT-hook-like domain signature 38 48 IPR017956 GO:0003677
Lele29g0319 341 SMART AT_hook_2 38 50 IPR017956 GO:0003677
Lele29g0319 341 SMART AT_hook_2 68 80 IPR017956 GO:0003677
Lele29g0319 341 MobiDBLite consensus disorder prediction 52 70 - -
Lele29g0319 341 ProSiteProfiles PPC domain profile profile. 95 239 IPR005175 -
Lele29g0319 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 216 IPR005175 -
Lele29g0319 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0319 Lele-ChrLele29 1936373 1938980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0319 33 215 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 44.920 1.92e-40 141