LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele29g0309	ATGGCTATTGTTGGTGTGCACAATGTGTCAGTGCTTGACTCTTCTTTCCTTAGGGACTCTCATTCTCAATCATCGAGTAGGCGTGGAGATGGAGGCAGGGGAATCACCAAGCTATCTGCACTTTCGCAACTATGGGAAGAGATTGAGGATGAGCATATTCAAGGATCTCATCATGATAAGCAAGAAGAGGAGTTAAACAATTCTAGTTGTGAAAACTCTTCTGATCTCGGAGATCTTGAGAGGGAAAGAGTAAGGAAAATTTTCAGAGAATGGATGAACAGTGGCGCTAGAGATGAAGAATCCAGCATTTCCATTAGAAATAACAGTCCCAGGGACGAGTGGCTTGGTGAAACAGAGCAAGAGAGGGTGAGAATTATAAGAGAGTGGGTTCAAATGAGTAGCCGGCAGCAGAACGGTGTTTCTTCTGGGGACAGTAGAGAAGAGCAATCTGCAGAAATTGAACGTGTACGTAATGGATTTGTTATGAATAAAAATGAAGGGCAGAGTGAGCAAACTCGCAGGGGAATTCGAAAATTATGTGGCAGACAGGTTTTGCTTGATATGTTAAACAAGGGTGAGAGAGAAAGGCAGAGAGAAGTTCAGGAATTGTTGGACCGTAGGGCTGTATCTCATTTTCTCCATCGCAATCGCATTCAGGCATTGCTAAGAGGCAGGTTTCTGAGAAATGATAGAGTTGCTGATAAGAAAAGGACCACTTCCGTGTCGGACAGCGAATTAGGCTTACTGAGGCAAAAGCAGACTGTTTCAGGTTTAAGGGAAGGATTCTTCTCCAGAAAGAACATTTCTGGTTGCAGTTTAGAAAGCAACAATTTACCTGATACCTCATCAAACAGTGATATCGATGAAGCCAGCAGCTCACAATGTTCCTCGAATATAAATTCCAAACTATCTGAGCCCAGTTATCCAGGAACTGATGTAACTCAGAGACCTTCACTTGAGAAATTAGAATGGCAAGATTCTCCTGCTCACGTTGACGCAGAGGAACCACAGGATTTGAAAATAGAATCAAGAGATTCGTTACAGTCGTCAATCAATGTTGGGATCGTAGCAAGAGATGAATCTCCACGAAGTGTTTATGTGGCGTCAACCGAAGATTCGTCGTGTAAGGAACTTTCCCGATCACGTTTAACAATTGAAGATACAGAGCATTTCTCTGTGCATGTATTCAGTGAGGACCGTAACGAACAGTCTGATCATGGATATTATTCTGAGGGAAATATCACTGATTTCGATAACTTGAATGAACCTGCTGCTCCGGAAAGAGAGCTGTCCATAGAATTTGGAAATGATGAAAGTTATAGTCTTCCACTTGATGTTGAACAGAGAGATAACCCTGAGGGCATTGGCGGAACTCATGTAATTTATTTTTCTGACGACGACAATGAGCATAGTGGAGAACTTGGTGAACTGTTAAATAGGAGGCGAGTTTCTAATCTCCTTAGCAGCAGTTTTCGAGAGAATCTGGATCAGTTGGTACGATCATACGTTGAAAGGCAGAACGAAGCTCAAATGGAGTGGGAGCTGCAAGAGGAAGAAGACGACCTGGAGCAACAAGCTATGGATCATCAGATTGATGCTCAAGAAGGTCCTTCTCACAGTCCCATTTACTTGCCATCATCACCAACTCAATCTTCTCGACCATTTTGGGACCAACAGTCCCATAACGATCATTGGCCACAGAATGACACGAATAATCAACTCACAGGAATTGAGTGGGAGATTATTAATGGTTTGAGGATTGACATGGCTGGGTTACAGCAGAGGATGAATGAAATGCAGAGAATGCTGGAGGCCTGCATGGATATGCAGCTTCAGCTGCAACGCTCATTGAGACAAGAAGTTTCTGCAGCACTACTTAATTGCTCACATGATGGCTCATCCAGATTGCAAGATGATGATAACTCAAAGTGGGAATGTGTGAGGAAAGGACTCTGCTGTATATGCTGTGAGAGCAATATTGATTCTCTATTGTACAGATGCGGGCACATGTATAAAAGCTTGTTTTCCACATCCAGTATCCACTCCATTATTCACTTCATTCTTCAGTGCTTGTTATATACTCAAAACCTGAAGCGGTGGAACAAGGTTCGATATTCTGCTAAACTTTGGTTTCTCAGAAACAGAGCCTGGTTATTTCGTGCTCGAAAATTAAGCTTTGGCACCCTCAGCAATGGCATACCTTCCAAGCTCTCCGGGAAGAACCAGCTTGAAAGCCCCTTGGATCTCCCTGGAAGACAATGTCATGAGTCCCGTGTAGGTCTTCAGCCTCGTAGCTTCATCGGCGAGCCTCTAAAACATATCAGTCATGAGATTGTTCAGAATGATCATGGCCTGAAACGAAAGCTTCATCTCTGTGTGAACTTGCTTCAGAACTTCGTACACATATCTCCTGTACTCTACCCTACCTTTTTCCGCCTTCTATCTCTTCCTTTTCGTTCCTTTATTTCCACCACCTTTCCATTCAGTGCCTTCCTTCACCGGCTGCTCTGCTTTCTGTTCAGGGTCACTTGCATTTTCAGGAGTCACTTCTTGGACAGAGATGGTTCTCACATGGTCCTTGGTTTGCTTCTTCTGATTCGGTGTCTTTGTTTGCTCTTGTTGATCTTTTCACAACGGAAACTTGAGCAGCGCTTTCCTGCACAATTTTTCTGGTGGATGTGA	2682	0.4355	MAIVGVHNVSVLDSSFLRDSHSQSSSRRGDGGRGITKLSALSQLWEEIEDEHIQGSHHDKQEEELNNSSCENSSDLGDLERERVRKIFREWMNSGARDEESSISIRNNSPRDEWLGETEQERVRIIREWVQMSSRQQNGVSSGDSREEQSAEIERVRNGFVMNKNEGQSEQTRRGIRKLCGRQVLLDMLNKGERERQREVQELLDRRAVSHFLHRNRIQALLRGRFLRNDRVADKKRTTSVSDSELGLLRQKQTVSGLREGFFSRKNISGCSLESNNLPDTSSNSDIDEASSSQCSSNINSKLSEPSYPGTDVTQRPSLEKLEWQDSPAHVDAEEPQDLKIESRDSLQSSINVGIVARDESPRSVYVASTEDSSCKELSRSRLTIEDTEHFSVHVFSEDRNEQSDHGYYSEGNITDFDNLNEPAAPERELSIEFGNDESYSLPLDVEQRDNPEGIGGTHVIYFSDDDNEHSGELGELLNRRRVSNLLSSSFRENLDQLVRSYVERQNEAQMEWELQEEEDDLEQQAMDHQIDAQEGPSHSPIYLPSSPTQSSRPFWDQQSHNDHWPQNDTNNQLTGIEWEIINGLRIDMAGLQQRMNEMQRMLEACMDMQLQLQRSLRQEVSAALLNCSHDGSSRLQDDDNSKWECVRKGLCCICCESNIDSLLYRCGHMYKSLFSTSSIHSIIHFILQCLLYTQNLKRWNKVRYSAKLWFLRNRAWLFRARKLSFGTLSNGIPSKLSGKNQLESPLDLPGRQCHESRVGLQPRSFIGEPLKHISHEIVQNDHGLKRKLHLCVNLLQNFVHISPVLYPTFFRLLSLPFRSFISTTFPFSAFLHRLLCFLFRVTCIFRSHFLDRDGSHMVLGLLLLIRCLCLLLLIFSQRKLEQRFPAQFFWWM	893

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	273	321	-	-
	Lele29g0309	893	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	1	671	-	-
	Lele29g0309	893	Coils	Coil	582	609	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	134	157	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	52	66	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	52	77	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	273	345	-	-
	Lele29g0309	893	Coils	Coil	508	528	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	323	342	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	531	560	-	-
	Lele29g0309	893	MobiDBLite	consensus disorder prediction	540	560	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele29g0309	Lele-ChrLele29	1839867	1845836	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele12g0204	12	1639357	1642151	Lele29g0309	29	1839867	1845836	CCT
	Lele10g1088	10	22279144	22281926	Lele29g0309	29	1839867	1845836	CCT
	Lele29g0309	29	1839867	1845836	Lele31g1239	31	18681471	18684640	hybridization
	Lele29g0309	29	1839867	1845836	Lele32g0288	32	1803167	1806308	hybridization