Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0299 ATGGCGGAACAGAAGATTAGGCCCACCAAGAGCCGGGTGCTCTATGTTAGGATGAAGCTCCTACCCAGACACTCCAGGCCACAACAAGAACGAAGTTGCTTCCGCACTCGTTACAAATGGCTTCTCTGGTTTTCATTCTCCCTCTACTTCTTCGCATCCTATCTCATCGGCAGTGATTCCCGCCCTAAACTCAGTTATCTCCGCCCAACCCATGTCTCCAACTCCGAATCCGCTCTTCTCACTCGTGCCCTTTTCGAGGCCTCGCACATGGCTCCTCGGAAACCTCAAACCTCTCCGGGTGAGCTCAAATTTTCAAACTTTTCTGCTTTGTATATTTGTCTCCAACAATGGCCATTTGACTCAAAGGCTGTTAATGTTATTACAGGTGTATTGAAGGATTTGAAGATTTTTGTGTACGATTTGCCTCCGAAATATAACACCGATTGGCTCGCCAATGACAGGTGCACCAGCCATTTGTTTGCGTCCGAAGTGGCCTTTCACAGGGCCCTGTTGACGAGCGACGTCCGCACATTTGACCCATACGAAGCTGACTTCTTCTTCGTGCCCGTCTACGTCTCCTGCAACTTCAGTACCGTCAATGGCTTCCCGTCGATCGGTCACGCGCGCTCCCTCATTGCTTCCGCCGTACAACTCATCTCCGAAGAGTACCACTTTTGGAATCGGAGCAGCGGGTCCGACCACGTGTTCGTCGCTTCGCACGACTTCGGGGCATACTTTCTCTCTGATTTGAAAATCCTTTTGTTTTCTTTTCGGTCTGAAAAGGAGGACGCGGCGGTTGCGGACGGGATACCAGAAATCTTGAAGAATTCGGTTATATTACAGACGTTTGGTGTTCAATACAAGCACCCGTGCCAAGACGTGGAGAATGTGGTGATACCACCCTACGTGTCGCCGGAAAGCTTGCGGAACCAGGAGAAAGCTCCAGTGGGAGCAAAGCGAGACATTTGGGTGTTTTTCAGAGGGAAAATGGAGGTCCATCCGAAGAACGTCAGCGGACGTTTTTACAGCAAGAGGGTGCGAACGGCGATATGGCGGAGATATAACGGTGACCGGAGGTTTTACCTGCGGAGGCATAGGTTTGCGGGGTACCAGTCGGAGATAGCTCGGTCAGTGTTCTGCCTGTGCCCGCTGGGGTGGGCCCCGTGGAGCCCTCGGCTGGTGGAATCAGTGGCATTGGGGTGCGTGCCGGTGATAATCGCGGACGGTATCCGGTTGCCGTTTGAATCGGCGGTCAGTTGGGCGGAGATATCGGTGACCGTGGCGGAGAACGACGTGGGGAGGCTGGGGGAGATACTGGAGGAGGTGGCGGCGACCAATCTGAGTGCGATACAGAGGAAGCTGTGGGACCCGAGGACGAAGCGGGCCCTGCTGTTCAACAGTGAGATGGAAGAAGGTGACGCCACGTGGCAGGTGCTTCAGACGCTGGGCTCGAAGCTGGACAGATCCTACAGTAGGTCGAGGGTTTCAGGCCTATTGGAGAGCTACACGTAA 1512 0.5377 MAEQKIRPTKSRVLYVRMKLLPRHSRPQQERSCFRTRYKWLLWFSFSLYFFASYLIGSDSRPKLSYLRPTHVSNSESALLTRALFEASHMAPRKPQTSPGELKFSNFSALYICLQQWPFDSKAVNVITGVLKDLKIFVYDLPPKYNTDWLANDRCTSHLFASEVAFHRALLTSDVRTFDPYEADFFFVPVYVSCNFSTVNGFPSIGHARSLIASAVQLISEEYHFWNRSSGSDHVFVASHDFGAYFLSDLKILLFSFRSEKEDAAVADGIPEILKNSVILQTFGVQYKHPCQDVENVVIPPYVSPESLRNQEKAPVGAKRDIWVFFRGKMEVHPKNVSGRFYSKRVRTAIWRRYNGDRRFYLRRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFESAVSWAEISVTVAENDVGRLGEILEEVAATNLSAIQRKLWDPRTKRALLFNSEMEEGDATWQVLQTLGSKLDRSYSRSRVSGLLESYT 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0299 503 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 100 461 IPR004263 GO:0006486|GO:0016757
Lele29g0299 503 Pfam Exostosin family 132 441 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0299 Lele-ChrLele29 1766924 1768693 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1131 11 18624400 18625554 Lele29g0299 29 1766924 1768693 CCT
Lele12g0190 12 1487196 1488347 Lele29g0299 29 1766924 1768693 CCT
Lele29g0299 29 1766924 1768693 Lele31g1253 31 18774527 18776291 hybridization
Lele29g0299 29 1766924 1768693 Lele32g0277 32 1723107 1724876 hybridization