Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0294 ATGCTTTGTTTGGTTTCGATTCTTCTAGAATTGCCTTTGTTGCACGAGCGTAATTTTACATACGGTGGCCCTATGGAGCCTGACAGATTAAATTCCCCGACAACGTTTGATATGCCGTTGGAGATTTTGGGTTATGAGTTGCACTTTTCTCAGGATCCTAATTCCAAGCACTTGGGAACTACTGTATGGGATGCATCACTTGTGTTCGCCAAGTTTCTAGAAAAAAATTGCAGAAAGGGAAAGTTTTCCCCAGATAAGCTTAAAGGAAAACGTGTAATTGAACTTGGAGCTGGTTGTGGAGTCTCTGGATTTGGCATGGCTTTGCTGGGGTGTAATGTTATAGTGACAGACCAAAAGGAGGTATTGCCTATACTACAGAGAAATGTAGAGCGAAATATTTCAAGGGTCATGCAGAAAAATCCTGATTTATTTGGCTCAATCAAGGTTTCAGAGTTACAGTGGGGGGACAGGGATCACATTGGGGCTGTCGAACCTCCCTTTGACTACATTATTGGCACTGATGTTGTTTATGTAGAGCATTTGTTGGAGCCTCTGCTGCAGACAATCGTTGCTTTATCTGGACCTAGGACTACAATTTTGCTGGGCTACGAGATCCGTTCCACCATCGTCCATGAGCAGATGCTTCAGATGTGGAAAAAAGTTTTCAATGTCAAGACTGTTCCAAAGTCCAAGATGGATGAAACGTTCCAACATCCTAGTATTCAGCTCTTCGTCATGGGATCAAAACCTAAGGCAGAGCGCCTAGAAAAGACAGGTCTCGTTACTGATGCTGAGAAAGTTGATGGCGTTGAAACGAGTGGGGAAGACAACATTGGTGACGAAAATGTTGCCGAAGAAAAAGCTGAGACAATCCCCCCGAACACAAAACTCAGTGAGTGGGAAGCCAGGAGATATGGCTCGATGGCTGCAAGGATGTTGCGAGATGTGAAAATAACATGA 960 0.4396 MLCLVSILLELPLLHERNFTYGGPMEPDRLNSPTTFDMPLEILGYELHFSQDPNSKHLGTTVWDASLVFAKFLEKNCRKGKFSPDKLKGKRVIELGAGCGVSGFGMALLGCNVIVTDQKEVLPILQRNVERNISRVMQKNPDLFGSIKVSELQWGDRDHIGAVEPPFDYIIGTDVVYVEHLLEPLLQTIVALSGPRTTILLGYEIRSTIVHEQMLQMWKKVFNVKTVPKSKMDETFQHPSIQLFVMGSKPKAERLEKTGLVTDAEKVDGVETSGEDNIGDENVAEEKAETIPPNTKLSEWEARRYGSMAARMLRDVKIT 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0294 319 CDD AdoMet_MTases 91 205 - -
Lele29g0294 319 Pfam Lysine methyltransferase 47 210 IPR019410 -
Lele29g0294 319 MobiDBLite consensus disorder prediction 270 295 - -
Lele29g0294 319 Gene3D Vaccinia Virus protein VP39 42 253 IPR029063 -
Lele29g0294 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 201 IPR029063 -
Lele29g0294 319 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 26 237 IPR019410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0294 Lele-ChrLele29 1739717 1742903 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0294 29 1739717 1742903 Lele09g1135 09 20486156 20487804 CCT
Lele29g0294 29 1739717 1742903 Lele10g1107 10 22453780 22455430 CCT
Lele29g0294 29 1739717 1742903 Lele11g1137 11 18661328 18662962 CCT
Lele29g0294 29 1739717 1742903 Lele12g0185 12 1445416 1447070 CCT
Lele29g0294 29 1739717 1742903 Lele31g1258 31 18800243 18803835 hybridization
Lele29g0294 29 1739717 1742903 Lele32g0272 32 1694607 1697321 hybridization