Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele29g0279 | ATGAACAGAGCTATTTCCATAAACGAGCTCGAAAAGATAATAGAGATAATAGCAAGAAGCAAACCTGGATCTAGACCAGATAGAAGAGGAGGGAGGAAGAGGGGAGTGAATTCGAAAGCAGAGAAATGTGCAGCTGAATCATCTGACTCGAAATCTGGGAAGAAGGACTTCTCGACGGCGATTTTGGAGCGTAAGAAGTCGCCGAATCGACTGGTTGTAGATGAGGCAGTCAACGACGACAACTCAGTGGTGTCGATGCACCCTGAAACCATGGAAAAGCTGCAGCTTTTCCGAGGCGATACTATCCTCATCAAGGGGAAGAAGCGAAAGGATACAATTTGCATAGCCCTTGCTGACGACACGTGTGAGGAACCCAAGATCAGAATGAATAAAGTTGTGAGGTCAAATTTGAGGGTTCGTCTTGGGGATGTTGTATCTGTGCATCAGTGCCCTGATGTTAAGTATGGGAAACGTGTGCATATTCTACCCATCGATGATACCGTTGAAGGTGTCACTGGCAATCTGTTTGATGCTTACTTGAAACCTTACTTCTTGGAGGCTTACCGTCCTGTTAGAAAGGGGGATTTGTTTCTTGTCCGTGGAGGGATGAGAAGTGTAGAGTTCAAGGTCATTGAGACTGATCCAGGGGAGTATTGTGTGGTTGCTCCAGACACTGAAATCTTCTGTGAAGGGGAGCCTGTAAAAAGGGAGGACGAGGAAAGGTTGGATGAAGTTGGATATGATGATGTGGGTGGTGTTAGGAAACAAATGGCACAAATTCGCGAGTTGGTAGAGCTCCCATTGAGGCATCCTCAACTTTTTAAATCAATTGGAAAGCATTTGAAGAAGCTGAAAAGAATGCACCATCCATCATCTTTATTGATGAGATTGATTCCATTGCGCCCAAGAGAGAGAAGACACGGTGAAGTTGAGAGGAGGATTGTTTCACAACTTTTGACTCTTATGGATGGATTAAAATCTCGGTCTCATGTTATTGTTATTGGTGCTACAAATCGTCCAAACAGCATTGATCCAGCATTGAGGAGGTTTGGTAGATTTGATAGGGAAATTGATATTGGGGTTCCTGATGAAGTTGGGCGACTTGAAGTCCTCCGCATCCATACCAAAAACATGAAGCTCTCTGACGATGTTGATTTGGAGAAAATTGCAAAGGATACTCATGGGTATGTTGGTTCTGACCTTGCGGCTCTTTGCACTGAAGCTGCTCTGCAATGCATTAGGGAGAAGATGGATGTCATTGACTTGGAAGATGAGACCATTGATGCTGAAGTACTGAACTCTATGGCAGTTTCAAATGAGCATTTCCAAACTGCTCTAGGAACAAGCAATCCATCAGCTCTACGTGAAACTGTTGTTGAGGTGCCTAATGTCAGTTGGGATGACATTGGAGGCCTTGAGAATGTCAAGCGCGAGCTGCAAGAGACTGTTCAATATCCTGTGGAGCACCCAGAAAAATTCGAGAAATTTGGCATGTCACCATCAAAGGGGGTCCTCTTCTATGGTCCTCCAGGATGTGGAAAGACTTTGTTGGCCAAGGCAATTGCTAATGAATGTCAAGCAAACTTCATCAGTGTGAAAGGTCCTGAATTGCTTACAATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATTTTTGACAAGGCTAGACAATCTGCTCCATGTGTCCTCTTCTTTGATGAGCTTGACTCCATTGCTACTCAGAGAGGAAGCAGTGTTGGGGATGCTGGTGGTGCTGCTGACAGAGTTCTTAATCAACTCCTGACTGAAATGGATGGCATGTCTGCAAAGAAGACAGTATTCATTATTGGGGCAACGAACAGACCTGATATCATTGACCCTGCACTCCTTCGGCCGGGTCGCCTTGATCAATTGATTTATATTCCTCTTCCTGATGAGGACTCCCGTCATCAAATCTTCAAGGCCTGCTTGAGGAAGTCACCTGTCTCAAAAGATGTTGATCTGAGAGCACTAGCTAAGTATACACAGGGTTTCAGTGGGGCTGATATTACAGAAATATGCCAGCGAGCCTGCAAATATGCTATAAGAGAAAACATAGAAAAGGATATAGAGCGAGAGAGGAGAAGAAGTGAGAACCCCGAGGCCATGGACGAAGACATTGACGAAGAAGTTGCAGAGATTAAGGCTGCACATTTTGAAGAGTCTATGAAGTTTGCCCGTAGGAGCGTTAGTGATGCTGACATTCGTAAATATCAGGCATTTGCTCAAACCTTACAGCAATCCAGGGGTTTTGGAAGTGAATTCAGGTTTTCAGAGACTGGAACGAGGGCTGCTGGGTCTGACCCCTTTGCCACTTCTGCTGCTGCAGCCGATGATGACGATTTGTATAGTTAA | 2376 | 0.4491 | MNRAISINELEKIIEIIARSKPGSRPDRRGGRKRGVNSKAEKCAAESSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVSMHPETMEKLQLFRGDTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGKHLKKLKRMHHPSSLLMRLIPLRPRERRHGEVERRIVSQLLTLMDGLKSRSHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLEKIAKDTHGYVGSDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEAMDEDIDEEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSETGTRAAGSDPFATSAAAADDDDLYS | 791 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele29g0279 | 791 | FunFam | Bromodomain protein | 322 | 361 | - | - | |
Lele29g0279 | 791 | Pfam | AAA+ lid domain | 659 | 699 | IPR041569 | - | |
Lele29g0279 | 791 | Pfam | AAA+ lid domain | 383 | 425 | IPR041569 | - | |
Lele29g0279 | 791 | SUPERFAMILY | Cdc48 domain 2-like | 152 | 244 | IPR029067 | - | |
Lele29g0279 | 791 | SMART | AAA_5 | 98 | 363 | IPR003593 | - | |
Lele29g0279 | 791 | SMART | AAA_5 | 500 | 639 | IPR003593 | - | |
Lele29g0279 | 791 | CDD | AAA | 470 | 637 | - | - | |
Lele29g0279 | 791 | FunFam | Cell division control 48 | 153 | 249 | - | - | |
Lele29g0279 | 791 | Pfam | ATPase family associated with various cellular activities (AAA) | 504 | 637 | IPR003959 | GO:0005524|GO:0016887 | |
Lele29g0279 | 791 | Pfam | ATPase family associated with various cellular activities (AAA) | 304 | 360 | IPR003959 | GO:0005524|GO:0016887 | |
Lele29g0279 | 791 | SMART | CDC48_2_2 | 170 | 236 | IPR004201 | - | |
Lele29g0279 | 791 | CDD | AAA | 309 | 360 | - | - | |
Lele29g0279 | 791 | SUPERFAMILY | ADC-like | 66 | 150 | IPR009010 | - | |
Lele29g0279 | 791 | FunFam | Transitional endoplasmic reticulum ATPase | 47 | 152 | - | - | |
Lele29g0279 | 791 | FunFam | Transitional endoplasmic reticulum ATPase | 454 | 637 | - | - | |
Lele29g0279 | 791 | Gene3D | - | 153 | 234 | - | - | |
Lele29g0279 | 791 | Gene3D | - | 47 | 152 | - | - | |
Lele29g0279 | 791 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 244 | 452 | IPR027417 | - | |
Lele29g0279 | 791 | Pfam | Cell division protein 48 (CDC48), domain 2 | 172 | 235 | IPR004201 | - | |
Lele29g0279 | 791 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 462 | 750 | IPR027417 | - | |
Lele29g0279 | 791 | MobiDBLite | consensus disorder prediction | 767 | 791 | - | - | |
Lele29g0279 | 791 | Gene3D | - | 235 | 287 | IPR027417 | - | |
Lele29g0279 | 791 | MobiDBLite | consensus disorder prediction | 19 | 57 | - | - | |
Lele29g0279 | 791 | ProSitePatterns | AAA-protein family signature. | 607 | 625 | IPR003960 | GO:0005524|GO:0016887 | |
Lele29g0279 | 791 | PANTHER | AAA-FAMILY ATPASE | 62 | 279 | - | - | |
Lele29g0279 | 791 | Gene3D | - | 454 | 637 | IPR027417 | - | |
Lele29g0279 | 791 | Gene3D | - | 296 | 361 | IPR027417 | - | |
Lele29g0279 | 791 | Gene3D | - | 362 | 453 | - | - | |
Lele29g0279 | 791 | ProSitePatterns | AAA-protein family signature. | 331 | 349 | IPR003960 | GO:0005524|GO:0016887 | |
Lele29g0279 | 791 | FunFam | Cell division control 48 | 362 | 453 | - | - | |
Lele29g0279 | 791 | Pfam | Cell division protein 48 (CDC48), N-terminal domain | 70 | 151 | IPR003338 | - | |
Lele29g0279 | 791 | Gene3D | - | 641 | 749 | - | - | |
Lele29g0279 | 791 | SMART | CDC48_N_2 | 70 | 153 | IPR003338 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele29g0279 | Lele-ChrLele29 | 1656149 | 1661871 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele29g0279 | 433 | 696 | Calmodulin-binding Proteins | AT3G56690 | 48.106 | 4.31e-80 | 276 |