Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0279 ATGAACAGAGCTATTTCCATAAACGAGCTCGAAAAGATAATAGAGATAATAGCAAGAAGCAAACCTGGATCTAGACCAGATAGAAGAGGAGGGAGGAAGAGGGGAGTGAATTCGAAAGCAGAGAAATGTGCAGCTGAATCATCTGACTCGAAATCTGGGAAGAAGGACTTCTCGACGGCGATTTTGGAGCGTAAGAAGTCGCCGAATCGACTGGTTGTAGATGAGGCAGTCAACGACGACAACTCAGTGGTGTCGATGCACCCTGAAACCATGGAAAAGCTGCAGCTTTTCCGAGGCGATACTATCCTCATCAAGGGGAAGAAGCGAAAGGATACAATTTGCATAGCCCTTGCTGACGACACGTGTGAGGAACCCAAGATCAGAATGAATAAAGTTGTGAGGTCAAATTTGAGGGTTCGTCTTGGGGATGTTGTATCTGTGCATCAGTGCCCTGATGTTAAGTATGGGAAACGTGTGCATATTCTACCCATCGATGATACCGTTGAAGGTGTCACTGGCAATCTGTTTGATGCTTACTTGAAACCTTACTTCTTGGAGGCTTACCGTCCTGTTAGAAAGGGGGATTTGTTTCTTGTCCGTGGAGGGATGAGAAGTGTAGAGTTCAAGGTCATTGAGACTGATCCAGGGGAGTATTGTGTGGTTGCTCCAGACACTGAAATCTTCTGTGAAGGGGAGCCTGTAAAAAGGGAGGACGAGGAAAGGTTGGATGAAGTTGGATATGATGATGTGGGTGGTGTTAGGAAACAAATGGCACAAATTCGCGAGTTGGTAGAGCTCCCATTGAGGCATCCTCAACTTTTTAAATCAATTGGAAAGCATTTGAAGAAGCTGAAAAGAATGCACCATCCATCATCTTTATTGATGAGATTGATTCCATTGCGCCCAAGAGAGAGAAGACACGGTGAAGTTGAGAGGAGGATTGTTTCACAACTTTTGACTCTTATGGATGGATTAAAATCTCGGTCTCATGTTATTGTTATTGGTGCTACAAATCGTCCAAACAGCATTGATCCAGCATTGAGGAGGTTTGGTAGATTTGATAGGGAAATTGATATTGGGGTTCCTGATGAAGTTGGGCGACTTGAAGTCCTCCGCATCCATACCAAAAACATGAAGCTCTCTGACGATGTTGATTTGGAGAAAATTGCAAAGGATACTCATGGGTATGTTGGTTCTGACCTTGCGGCTCTTTGCACTGAAGCTGCTCTGCAATGCATTAGGGAGAAGATGGATGTCATTGACTTGGAAGATGAGACCATTGATGCTGAAGTACTGAACTCTATGGCAGTTTCAAATGAGCATTTCCAAACTGCTCTAGGAACAAGCAATCCATCAGCTCTACGTGAAACTGTTGTTGAGGTGCCTAATGTCAGTTGGGATGACATTGGAGGCCTTGAGAATGTCAAGCGCGAGCTGCAAGAGACTGTTCAATATCCTGTGGAGCACCCAGAAAAATTCGAGAAATTTGGCATGTCACCATCAAAGGGGGTCCTCTTCTATGGTCCTCCAGGATGTGGAAAGACTTTGTTGGCCAAGGCAATTGCTAATGAATGTCAAGCAAACTTCATCAGTGTGAAAGGTCCTGAATTGCTTACAATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATTTTTGACAAGGCTAGACAATCTGCTCCATGTGTCCTCTTCTTTGATGAGCTTGACTCCATTGCTACTCAGAGAGGAAGCAGTGTTGGGGATGCTGGTGGTGCTGCTGACAGAGTTCTTAATCAACTCCTGACTGAAATGGATGGCATGTCTGCAAAGAAGACAGTATTCATTATTGGGGCAACGAACAGACCTGATATCATTGACCCTGCACTCCTTCGGCCGGGTCGCCTTGATCAATTGATTTATATTCCTCTTCCTGATGAGGACTCCCGTCATCAAATCTTCAAGGCCTGCTTGAGGAAGTCACCTGTCTCAAAAGATGTTGATCTGAGAGCACTAGCTAAGTATACACAGGGTTTCAGTGGGGCTGATATTACAGAAATATGCCAGCGAGCCTGCAAATATGCTATAAGAGAAAACATAGAAAAGGATATAGAGCGAGAGAGGAGAAGAAGTGAGAACCCCGAGGCCATGGACGAAGACATTGACGAAGAAGTTGCAGAGATTAAGGCTGCACATTTTGAAGAGTCTATGAAGTTTGCCCGTAGGAGCGTTAGTGATGCTGACATTCGTAAATATCAGGCATTTGCTCAAACCTTACAGCAATCCAGGGGTTTTGGAAGTGAATTCAGGTTTTCAGAGACTGGAACGAGGGCTGCTGGGTCTGACCCCTTTGCCACTTCTGCTGCTGCAGCCGATGATGACGATTTGTATAGTTAA 2376 0.4491 MNRAISINELEKIIEIIARSKPGSRPDRRGGRKRGVNSKAEKCAAESSDSKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVSMHPETMEKLQLFRGDTILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGKHLKKLKRMHHPSSLLMRLIPLRPRERRHGEVERRIVSQLLTLMDGLKSRSHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLEKIAKDTHGYVGSDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEAMDEDIDEEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSETGTRAAGSDPFATSAAAADDDDLYS 791
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0279 791 FunFam Bromodomain protein 322 361 - -
Lele29g0279 791 Pfam AAA+ lid domain 659 699 IPR041569 -
Lele29g0279 791 Pfam AAA+ lid domain 383 425 IPR041569 -
Lele29g0279 791 SUPERFAMILY Cdc48 domain 2-like 152 244 IPR029067 -
Lele29g0279 791 SMART AAA_5 98 363 IPR003593 -
Lele29g0279 791 SMART AAA_5 500 639 IPR003593 -
Lele29g0279 791 CDD AAA 470 637 - -
Lele29g0279 791 FunFam Cell division control 48 153 249 - -
Lele29g0279 791 Pfam ATPase family associated with various cellular activities (AAA) 504 637 IPR003959 GO:0005524|GO:0016887
Lele29g0279 791 Pfam ATPase family associated with various cellular activities (AAA) 304 360 IPR003959 GO:0005524|GO:0016887
Lele29g0279 791 SMART CDC48_2_2 170 236 IPR004201 -
Lele29g0279 791 CDD AAA 309 360 - -
Lele29g0279 791 SUPERFAMILY ADC-like 66 150 IPR009010 -
Lele29g0279 791 FunFam Transitional endoplasmic reticulum ATPase 47 152 - -
Lele29g0279 791 FunFam Transitional endoplasmic reticulum ATPase 454 637 - -
Lele29g0279 791 Gene3D - 153 234 - -
Lele29g0279 791 Gene3D - 47 152 - -
Lele29g0279 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 452 IPR027417 -
Lele29g0279 791 Pfam Cell division protein 48 (CDC48), domain 2 172 235 IPR004201 -
Lele29g0279 791 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 750 IPR027417 -
Lele29g0279 791 MobiDBLite consensus disorder prediction 767 791 - -
Lele29g0279 791 Gene3D - 235 287 IPR027417 -
Lele29g0279 791 MobiDBLite consensus disorder prediction 19 57 - -
Lele29g0279 791 ProSitePatterns AAA-protein family signature. 607 625 IPR003960 GO:0005524|GO:0016887
Lele29g0279 791 PANTHER AAA-FAMILY ATPASE 62 279 - -
Lele29g0279 791 Gene3D - 454 637 IPR027417 -
Lele29g0279 791 Gene3D - 296 361 IPR027417 -
Lele29g0279 791 Gene3D - 362 453 - -
Lele29g0279 791 ProSitePatterns AAA-protein family signature. 331 349 IPR003960 GO:0005524|GO:0016887
Lele29g0279 791 FunFam Cell division control 48 362 453 - -
Lele29g0279 791 Pfam Cell division protein 48 (CDC48), N-terminal domain 70 151 IPR003338 -
Lele29g0279 791 Gene3D - 641 749 - -
Lele29g0279 791 SMART CDC48_N_2 70 153 IPR003338 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele29g0279 Lele-ChrLele29 1656149 1661871 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0279 433 696 Calmodulin-binding Proteins AT3G56690 48.106 4.31e-80 276