Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0271 ATGTGTAAAACCAAAATGGCCGTCGACGCTTCCACCCCTCGAAACTCTCGCACCTCTAAACCAAGAACTCCATCTTCTTCCAGACCCACCTTACCCGCCGCCGCCGCCGCCGCCTCTTCTTCCTCCGACCCCTCCTCCTCTTACTCCAGCTCTGCCGCTTACTCTGGCTCCTCCGGTTTCAGACTCACCTCCGACACCTCCATTTCGAGCGGAACCTCTCTCGCTTGTTTTCGAGATAGCCTCCCCGAAAACCCCCACATCTATGACTTCTCTGAAATTTGCTCCGCCACCAACAATTTCCTCGCCAAGCGTTATTCCTCCTCCTCCTCCTCTTCTATTCCCTCTTGGCGATGTACTCTCAGAGGCCGAGACGTCATTGTTTTCCAGCGCAAGTTCCGTCGCAAACTCCAGGTGAATCAACTCAGAGAACGCCTCTCTGTGATCTGCCGTAGCCACCACGTTAGCATCATCAAGCTCGTCGGCGCTTGCATCTCTGGCGACCACATCTACCTCGTGTACGACTTCGTGAATGGAGCTAATCTCTCCGATTGTTTGCGAAATTCGAAGAACATTAACTTCACGGTCCTGTCCAGTTGGATTTCCAGAATGCAGGTTGCTACGGATCTCGCCGAGGGGCTTGATTATATCCACAATAAAACCGGCCTAACCCTAAACTTCGTGCACAATCACATAAAGAGTAGTGCGATAATCGTGACAGAACCTTCATTCAACGCCAGGATTTCACACTTCGGCGCCGCTCAGCTGTGCGGTGAGATCGACGAAGAGAGCGAAAATGCGAAACAGATGGAAGAGATTCCAGAGGAGCCGTCTTCCTCCCCATCTTCCTCGAAATCAAAGGACGTAAGACGATCGAGAAGCTCTAACACGCAATTCGAGGGCGTAAGAGGGTACATGGCACCGGAATACCAATTCATCGGCGGGCCGACCCAGAAGTCCGATGTGTACGCGTTTGGGGTAGTGATCTTGGAGTTGCTGTCGGGAGACGAACCTTTGAAATTCAAATACGATAAGAAGACCGGCGAGTTCGTTACCAACTCGGTGATCGATACGGCGAGGGCTGTCCTGGAGGGTGATTCCGACGGCGGAGGTGGCGTGGAAGGGAGGCTGAGGAGATGGATGGACCGGAGGCTGAAGGACTCGTTCCCGGTGGAGGTGGTAGAGGAGGTGACACGTGTAGCACTTGAGTGCGTAAACGTTGATCCAGATAAGAGGCCCAGTATGGGACGCGTGGCTGGAAAAATCTCGCGGCTATATCTCAAGTCTAGGATTTGGTCCGACAACAGGAGAACGCCCACTGATATTCTTTCAGCCTCATTCGCTCCTCGATGA 1350 0.5311 MCKTKMAVDASTPRNSRTSKPRTPSSSRPTLPAAAAAASSSSDPSSSYSSSAAYSGSSGFRLTSDTSISSGTSLACFRDSLPENPHIYDFSEICSATNNFLAKRYSSSSSSSIPSWRCTLRGRDVIVFQRKFRRKLQVNQLRERLSVICRSHHVSIIKLVGACISGDHIYLVYDFVNGANLSDCLRNSKNINFTVLSSWISRMQVATDLAEGLDYIHNKTGLTLNFVHNHIKSSAIIVTEPSFNARISHFGAAQLCGEIDEESENAKQMEEIPEEPSSSPSSSKSKDVRRSRSSNTQFEGVRGYMAPEYQFIGGPTQKSDVYAFGVVILELLSGDEPLKFKYDKKTGEFVTNSVIDTARAVLEGDSDGGGGVEGRLRRWMDRRLKDSFPVEVVEEVTRVALECVNVDPDKRPSMGRVAGKISRLYLKSRIWSDNRRTPTDILSASFAPR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0271 449 MobiDBLite consensus disorder prediction 9 48 - -
Lele29g0271 449 Pfam Protein kinase domain 135 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0271 449 Gene3D Transferase(Phosphotransferase) domain 1 177 439 - -
Lele29g0271 449 SUPERFAMILY Protein kinase-like (PK-like) 117 417 IPR011009 -
Lele29g0271 449 ProSiteProfiles Protein kinase domain profile. 62 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0271 449 MobiDBLite consensus disorder prediction 262 299 - -
Lele29g0271 449 MobiDBLite consensus disorder prediction 1 48 - -
Lele29g0271 449 PANTHER OS09G0572100 PROTEIN 1 449 - -
Lele29g0271 449 Coils Coil 252 272 - -
Lele29g0271 449 Gene3D Phosphorylase Kinase; domain 1 64 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0271 Lele-ChrLele29 1607458 1608807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0271 83 431 Receptor kinase-like Gene Family AT1G51940 29.429 3.23e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele29g0271 Pkinase 2e-23 CL0016