Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0266 ATGGAGAAAGTTGCCGCCACAAGGCTCTTGATTTGCTGTCTATTCGCTGTACTTTGTTTGCTGTCTTTCCCAGCAACTTGTTCAGAAGTCGCCCTCATTTTTGCTCGTTTGAATTTGATTATAAAAGAGGATGAAAGTGAGTTTAGTTACGACGAAGATTCAGACAGAGGACCATCTCGATGGGGAGATATAAAACCAGAATGGATACTGTGCAAAACTGGAGCAATGCAATCCCCCATTGATTTGATTAATAAAAGGGTTCAAGGTGTGTCCCATTTAGGGCCCCTCCAAATCAAGTATCGCCCTTCCAATGCCACTCTTGAAAATAGAGGCCATGATATCAAGTTGGAATGGGCTGCAGGCGCAGGCTATCTTCAAATCAACAAAACTCAGTATGTTCTCAAACAATGCCACTGGCATTCTTTCTCAGAACATACCATCGATGGCCAAAGATATGATCTAGAGTTACATATGGTGCACGAAACGGTAAGAGGAGAAATAGCAGTAGTTGGGATACTGTACAAATTTGGGGAACCAGATCCTTTCCTGTCATCGTTAAGGGATGAGTTAAAGGCCATATCTGATACGAATAAAACAGAAGAAAACGCGGGAATAGTTGATCCTTGGCTGATTAAACCAAGTAGCAAGAGTTATTACAGATACATGGGTTCTCTCACCACACCTGATTGTGCTGAAAACGTTGTTTGGACCATCCTTGCTGAGGTGAGAACTGTTTCAAAAGAGCAAGTCGAGATGCTTCGAGATGCCGTTCATGACGATTCAGAGAATAACGCTAGACCACTGCAGCCAATAAACAACCGTTTGGTGCAATTCTATCAACCAAAGGATTCTAAAAATTGA 861 0.4228 MEKVAATRLLICCLFAVLCLLSFPATCSEVALIFARLNLIIKEDESEFSYDEDSDRGPSRWGDIKPEWILCKTGAMQSPIDLINKRVQGVSHLGPLQIKYRPSNATLENRGHDIKLEWAAGAGYLQINKTQYVLKQCHWHSFSEHTIDGQRYDLELHMVHETVRGEIAVVGILYKFGEPDPFLSSLRDELKAISDTNKTEENAGIVDPWLIKPSSKSYYRYMGSLTTPDCAENVVWTILAEVRTVSKEQVEMLRDAVHDDSENNARPLQPINNRLVQFYQPKDSKN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0266 286 Coils Coil 183 203 - -
Lele29g0266 286 SMART Carb_anhydrase_2a 50 278 IPR001148 -
Lele29g0266 286 ProSiteProfiles Alpha-carbonic anhydrases profile. 46 280 IPR001148 -
Lele29g0266 286 ProSitePatterns Alpha-carbonic anhydrases signature. 143 159 IPR018338 GO:0004089|GO:0008270
Lele29g0266 286 PANTHER CARBONIC ANHYDRASE 45 274 IPR023561 GO:0004089|GO:0008270
Lele29g0266 286 FunFam Alpha carbonic anhydrase 3 45 284 - -
Lele29g0266 286 Pfam Eukaryotic-type carbonic anhydrase 57 278 IPR001148 -
Lele29g0266 286 SUPERFAMILY Carbonic anhydrase 47 276 IPR036398 -
Lele29g0266 286 CDD alpha_CA_prokaryotic_like 57 278 IPR041891 -
Lele29g0266 286 Gene3D Alpha carbonic anhydrase 44 285 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0266 Lele-ChrLele29 1568430 1570732 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0266 29 1568430 1570732 Lele09g1150 09 20590385 20592194 CCT
Lele29g0266 29 1568430 1570732 Lele10g1120 10 22568375 22569455 CCT
Lele29g0266 29 1568430 1570732 Lele11g1151 11 18779524 18781333 CCT
Lele29g0266 29 1568430 1570732 Lele31g1284 31 18980791 18984562 hybridization
Lele29g0266 29 1568430 1570732 Lele32g0251 32 1549320 1554754 hybridization