Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0265 ATGCTTCATGACTCAATTACCAGAGCATTTACAGCCAACCCCAAGGGAAAAAAAGTTGACCTAAAAAAAGAAAAAAATTCCACGCTGAGCAAGAGTCTTCAGGGAAAGTTTGAAACTTCCACTCCGGGTACATTTCACAAAAATGAAGATGTTAGCCGATATGAAGATGGACAAATACGATGTGGTTACGATCCCGCTCTACTTCAACTCTGGCCAGCCTTTCAAACAATTCATTTCCTCGTTGTATTCCTCTTTCATTCTGCTCTTAACTACCAGAAATCAAATCTTGACATTATGATTTATCTCTGGTTCATAATTGCCTTACTATGCATTAGTTCCAGTTCTGCTCGGCAATTCTACGACCCCACAAATTGTTCTACAGATCCTGACACCTACCCAGGTTCGAGGTACACATGTAAAACTCCACAAGATCCATGCGAAACTTACTTGGTGTTCAGATCAAACCAACGTTTTCACAACATTTCTGAGATCTCAAAGCTCTTCCACATGAACCCTGACACGCTGGTTCAAGAAAATAACCACCTTATTCTCAATTCTTCTTCTCAGTTCCTTGAAGCTGGCAAAGAGGTTCTTATTCCTGTCTCTTGTTCCTGTTCCGGTGGTTTCTATCAAGTCAGTTTCAGAAATGTAGTCACAGAAAACACAACATTTTCAGAGATTGCTTGTGGAGTTTATGAAGGGCTGCTCAAATCTTCCACACTTGAACAAGTTAACCTTAATACGACCATAGCTGGTTCTGAGCTTAATGTTCCTCTTAGGTGCGCATGTCCTGATAATTCCACTACAATTGGCAAGAAGGTGAAGTATTTTGTGACATACCCCATATTAACAGGAGATTCAGATAGTGACATAAGCGCGAAATTTGGCATCTCAGAAGAAGATCTCTTTGAAGCTAATGGCTTGCATAAATTTTCAACTCTTTTCGCAGAAACAACTGTTTTGATCCCAGCAAGAGATGATCCAATCAAGATAACTGATATTCCAAAGTCGTCTCCAGCTCCAACTTCTGGTTTTCTTCCAACACTTCCAGTGGCAAAAAGAGTAAAAAATCCAACAAGTTTGTATATCGCAGGTTCTGTCATAGGATCTTTGCTGTTAATCATGGCAGTTACTGTGAGTGTATTGTATGTTAAGGCCTTGAGGAAATGGAAGAGCGAAAGTGTTCAACCCTTCACTACTCCTTCAACCTCCTTCTTCATGTCACCGATGAGAGGTTCGTCAACAACTTCATGTCTTTCTCCGGATCTTCTAGCCGGAATAAAGTACTGTTTGGTCAATTACAGCATAGAAGAGCTCAGAATGGCCACAAAAGATTTCAATGAAGAAACCCAGAAAAGCGATTCAGTCTACAAGGGGTTAATCACTAATCTTGAGGTGATGATCAAGAGGACGAGATTTGAAGACACGCGTCGGGTAATTGATTTACATTCTAAGATCAACCACATCAATATTGTGAACTTACTTGGTGTTTGTTATGATGAGAGTGATATGTCATGGTCATATTTGGTTTTTGAATGGCCTAAAAATGGGCGCTTAAGGGACTGTTTATCTGATGGATCCAATAATCTCCTTTGTTGGAAACAGAGGACACAAATAGCTTTTGATATAGCCACAGTTCTTCACTATTTACACTGCTGTGCTTTTCCTTCTTACGCTCATTTGAATGTTAGCAGTAGAAATATATTCATTACAGAAGACCTTAGAGGGAAACTAGCAGACATTGCTGCACCAGAGAACCTTGTAAGCGGTCCAGTTTCTGAGAAAGTAGACATTTTTGCATTTGGGGTTGTGTTACTTGAATTGATCTCTGGAAGAGAGAACATTGAAGGGAAATTAGTGAGAGATTCTGTTGGGTTTTTGGGAGGGGGAAGAGGCAAAGAAGGAGGTTGCTTTGAAGGTTTGAGGAGTTTCATGGATCCTGATCTGAAGGATTATCATCTTGCAGAGTCTCTGTGTTTGGCTGTTTTAGCAAAGGCTTGTGTAGCTGATGAGCCCTTGCATAGACCAACCATGGATGATATCATGAAGGTCCTTGCAAAAATGGTTTCACCACAACAACCAGAGAAATAA 2091 0.4036 MLHDSITRAFTANPKGKKVDLKKEKNSTLSKSLQGKFETSTPGTFHKNEDVSRYEDGQIRCGYDPALLQLWPAFQTIHFLVVFLFHSALNYQKSNLDIMIYLWFIIALLCISSSSARQFYDPTNCSTDPDTYPGSRYTCKTPQDPCETYLVFRSNQRFHNISEISKLFHMNPDTLVQENNHLILNSSSQFLEAGKEVLIPVSCSCSGGFYQVSFRNVVTENTTFSEIACGVYEGLLKSSTLEQVNLNTTIAGSELNVPLRCACPDNSTTIGKKVKYFVTYPILTGDSDSDISAKFGISEEDLFEANGLHKFSTLFAETTVLIPARDDPIKITDIPKSSPAPTSGFLPTLPVAKRVKNPTSLYIAGSVIGSLLLIMAVTVSVLYVKALRKWKSESVQPFTTPSTSFFMSPMRGSSTTSCLSPDLLAGIKYCLVNYSIEELRMATKDFNEETQKSDSVYKGLITNLEVMIKRTRFEDTRRVIDLHSKINHINIVNLLGVCYDESDMSWSYLVFEWPKNGRLRDCLSDGSNNLLCWKQRTQIAFDIATVLHYLHCCAFPSYAHLNVSSRNIFITEDLRGKLADIAAPENLVSGPVSEKVDIFAFGVVLLELISGRENIEGKLVRDSVGFLGGGRGKEGGCFEGLRSFMDPDLKDYHLAESLCLAVLAKACVADEPLHRPTMDDIMKVLAKMVSPQQPEK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0265 696 Pfam LysM domain 284 323 IPR018392 -
Lele29g0265 696 Gene3D LysM domain 265 331 IPR036779 -
Lele29g0265 696 SUPERFAMILY Protein kinase-like (PK-like) 455 689 IPR011009 -
Lele29g0265 696 Gene3D Transferase(Phosphotransferase) domain 1 582 695 - -
Lele29g0265 696 Gene3D Transferase(Phosphotransferase) domain 1 445 581 - -
Lele29g0265 696 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 103 691 - -
Lele29g0265 696 ProSiteProfiles Protein kinase domain profile. 405 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0265 696 ProSiteProfiles LysM domain profile. 278 322 IPR018392 -
Lele29g0265 696 SMART LysM_2 279 323 IPR018392 -
Lele29g0265 696 SMART LysM_2 149 200 IPR018392 -
Lele29g0265 696 Pfam Protein tyrosine and serine/threonine kinase 470 581 IPR001245 GO:0004672|GO:0006468
Lele29g0265 696 CDD LysM 285 322 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0265 Lele-ChrLele29 1562572 1567093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0265 104 693 Receptor kinase-like Gene Family AT2G23770 29.794 2.96e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele29g0265 PK_Tyr_Ser-Thr 1.1e-13 CL0016