Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0262 ATGTTGCGGCACAGCAGCGATCACGGCGTTGTTTTAATGGAGGAAAACGACGAGTTGACGAAGGAGGAGAATAAGGCCGATCCGTTGAAGTGGGGGGAAGTGGCGGAGTTGACGAGGGGGAGCCACGTGGAGGAAGTGAAGGCCATGGGGAGGGATTACAGAAGGAAGGTAGTGAGGGTGGGAGGGGACACGTTGACGGTGGGTCAGGTGGCGGCGGTGGCGGAGGCGAGGCCGAGGGTGGAGCTGGAGCAGAGGAAGAGGGAGGGAGTGGAGGCGAGCAGCGCGTGGGTGATTGAGAGCGTGAAGAAAGGGACGGACAGTTATGGAGTGACGACGGGGTTCGGTGCCACGTCGCACCGGAGAACCGGCCGAGGGCTGGCACTGCAATCTGAGCTCATAAGGTTTTTGAATGCGGGAATATTTGGGAATGGAACAGAAGATTGCCATACCCTGCCGGCGAGTGCATCAAGAGCGGCGATGCTGGTCAGAATCAACACCCTCCTCCAAGGTTACTCCGGCATCAGATATAACATACTCGAAGCCATGGCAAAACTGCTCAACCATAGCATTACTCCATGCTTGCCCTTGCGTGGGTTCTATTTCAGCCTCAGGGGACACAGTCCCATTTTCATACCTCGCCGGACTGTTCACCGGAAGGCCAATTCAAAAGCCATTGGCCCCAACGGCGAGTCCCTAAGTCCGTCGGAAGCCTTCCGTCTAGCCTCTATCCATGAAGGATCCTTCGAGTTGCAGCCAAAGGAGGGCCTCGCGCTTGTTAATGGAACTGGGGTTGGAGCTGGTTTGGCTTCCATGGTTCTTTTCGAGGCCAACATTTTAACCGTTCTATCTGAAATCATGTCTGCAATTTTTGCTGAAGTAATGCACGATTTGACACACAGATTAAAACATCGTCCTGGGCAGATCGAAGCAGCAGCAATCATGGAACACATCTTAGATGGAAGTGTTTATGTTAAAGCTGCGAAAAAGTTGCACGAGATCGATCCTTTCCAAAAGCCTAAGCAAGATAGGTATGCTCTTAGAACTTCACCTCAATGGCTAGGTCCTCAGATAGAAGTTATCAGGTCATCAACAAAATCCATTGAGAGGGAGATCAACTCTGTCAATGATAACCCTTTGATTGATGTATCGAGGAACAAAGGTCTTCATGGTGGCAATTTTCAGGGCACCCCAGTTGGTGTTTCCATGGACAACACAAGACTAGTTTTGGCCGCCATTGGAAAGCTCCTTTTTGCTCAAATGTCTGAGCTTGTTAATGATTTTTACAACAATGGCTTGCCATAA 1302 0.5108 MLRHSSDHGVVLMEENDELTKEENKADPLKWGEVAELTRGSHVEEVKAMGRDYRRKVVRVGGDTLTVGQVAAVAEARPRVELEQRKREGVEASSAWVIESVKKGTDSYGVTTGFGATSHRRTGRGLALQSELIRFLNAGIFGNGTEDCHTLPASASRAAMLVRINTLLQGYSGIRYNILEAMAKLLNHSITPCLPLRGFYFSLRGHSPIFIPRRTVHRKANSKAIGPNGESLSPSEAFRLASIHEGSFELQPKEGLALVNGTGVGAGLASMVLFEANILTVLSEIMSAIFAEVMHDLTHRLKHRPGQIEAAAIMEHILDGSVYVKAAKKLHEIDPFQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKGLHGGNFQGTPVGVSMDNTRLVLAAIGKLLFAQMSELVNDFYNNGLP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0262 433 Pfam Aromatic amino acid lyase 65 433 IPR001106 -
Lele29g0262 433 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 433 IPR005922 GO:0005737|GO:0006559|GO:0016841
Lele29g0262 433 FunFam Phenylalanine ammonia-lyase 18 262 - -
Lele29g0262 433 Gene3D - 19 262 IPR024083 -
Lele29g0262 433 PANTHER HISTIDINE AMMONIA-LYASE 23 433 IPR001106 -
Lele29g0262 433 SUPERFAMILY L-aspartase-like 27 433 IPR008948 GO:0003824
Lele29g0262 433 MobiDBLite consensus disorder prediction 1 25 - -
Lele29g0262 433 CDD PAL-HAL 64 433 IPR001106 -
Lele29g0262 433 Gene3D Fumarase/aspartase (Central domain) 263 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0262 Lele-ChrLele29 1541424 1542848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0262 26 433 Monolignol Biosynthesis Gene Families AT3G53260 70.504 0.0 602