Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0258 ATGAAACTGGGTATTGAATTGAATGGAACCGCCGGTGATAGCCTTTTGCTTTTGCATGAAGAGCAGAGAAACGAGGGTGCAAATGGAAGAGGTTGGGTTTTTGCAGAGGAATGCCTGGGAATCTGTCTCTCTTCAGTTCATGCATCTCCCCTGTTTGTTGGAATACCTAAAAATATGGGCTTTGGAAATACAAGATCTGTAAGATTTCAAGATGATCTTGAACAAGCAAACATCCCCGCGACTAACAGTGACAACGGGATCAAGGTTAAATACAACATTGATGGAGTACAAATACCAGAGCCAAGCAGCACCAAAATGGCTCAGAAGGAGACAGCAGGAAAGACTGGGAAGTTCTTGAAAGGTAGAGTTCTGTCAAGAGTATTCTCAGAGGACTACGAAAGAGTGAAAAGAAAGATACTAGATCCTCGAGGACAAACCATTCATCGATGGAACAAGATTTTCTTGGTGGCATGTTTGATATCTCTGTTTGTGGACCCTCTATTCTTTTTCTTGCCAGTAGTTCGAGATGAAGTGTGCATTGAGATTGGAATAATGCCTGAAGTTATCCTCACAATCATCAGAACAGTTGCAGATTTCTTTTACATGTTTCAGATTTTCATGAAGTTTCGTACAGCTTATGTCGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATTGATTCTTCTAAGATTGCATTTAGGTACTTCAGAAAGAGTTTCTGGCTAGACTTTGTTGCAGCTATGCCTCTTCCACAGGTGTTGATTTGGCTTGTCATACCCTTCCTCAGGGGTTCTACCATGGCAAACACAAAAAATGTCCTTCGTTTCATCATCATCTTTCAGTATCTCCCTAGGCTGTTTCTTATTTTCCCTCTTTCATCACAAATTGTAAAGGCCACCGGTGTCGTGACACAAACAGCATGGGCCGGTGCTGCTTACAACCTCATGCTTTATATGTTGGCAAGCCATGGTTTAGGTGCTATATGGTACCTTCTATCGATTGAGCGACAGGAAGCATGCTGGAGAAGGGTCTGTGATCAGGAAAAGTCATATTGTCAATACGGATACTTTGACTGCCACAGGGTCAACGAAGCCAGTAGGGTCGCCTGGTTCATTGCAAGCAATGTCACAAATTTATGCTCACCTGATGTCAACTTTTATCCCTTTGGCATGTACGGTGATGCAGTCACTTCTCATGTCACAAGCTCCCCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTCAGTTCTCTAGGACAAAATCTTCTCACTAGCACTTTTGCTGGAGAAATCGTGTTTGCCATCGTAGTTGCGACCCTTGGACTGGTTCTTTTTGCCTTGCTTATTGGTAATATGCAGACATACCTTCAATCGACAACCGTCCGCTTAGAAGAGTGGAGAGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGGCAGCTACCTCCAGAACTAAGACAATCTGTAAGGAAGTATGATCAATACAAATGGTTGGCTACCAGAGGAGTTGATGAAGAGGCTCTTCTTAAAGGACTTCCTGTGGATCTTCGAAGAGACATCAAACGCCACCTTTGCCTTGACCTTGTCCGAGGCGTTCCATTATTTGACCAAATGGATGAGAGGATGCTGGATGCAATATGTGAGAGGCTGAAGCCTGCATTGTGCACGGAGGGAACTTACCTTGTTCGTGAGGGTGATCCAGTGAATGAGATGCTGTTCATAATAAGGGGCCATCTGGATTCCTACACGACCAATGGTGGCCGAACCGGGTTCTTCAATTCATGCCGGATTGGTCCGGGCGATTTCTGTGGAGAGGAAATACTGACATGGGCATTGGACCCTAGGCCAAGTGTGATACTTCCATCTTCCACTAGAACAGTGAAAGCCATCTCAGAAGTAGAAGCCTTTGCACTCATGTCAGAGGATCTCAAGTTTGTGGCATCTCAGTTCAGAAGGCTGCATAGTAAACAGCTGAGGCACAAGTTCAAGTTTTACTCGCACCAATGGCGAACATGGGCCGCTTGTTTCATCCAAACTGCATGGAGAAGGTTCAAGAAAAGGAAACTGAGGGCTAAATTGAACCAAACTGATGCAGAACCTGAAACACCAAGGTGTGGTGGTTCATCAGGCTTTGTTGGGTATGGATCCAGGATGGGTAGGAGCACTGTGAAAGGGGTTTCTGGGTTTGTAAGCCCTCTTCAGAAGCCTGAAGAACCAGATTTTACTGTTGATGAGTAA 2262 0.4443 MKLGIELNGTAGDSLLLLHEEQRNEGANGRGWVFAEECLGICLSSVHASPLFVGIPKNMGFGNTRSVRFQDDLEQANIPATNSDNGIKVKYNIDGVQIPEPSSTKMAQKETAGKTGKFLKGRVLSRVFSEDYERVKRKILDPRGQTIHRWNKIFLVACLISLFVDPLFFFLPVVRDEVCIEIGIMPEVILTIIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRKSFWLDFVAAMPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTQTAWAGAAYNLMLYMLASHGLGAIWYLLSIERQEACWRRVCDQEKSYCQYGYFDCHRVNEASRVAWFIASNVTNLCSPDVNFYPFGMYGDAVTSHVTSSPFFNKYFYCLWWGLRNLSSLGQNLLTSTFAGEIVFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPPELRQSVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFIQTAWRRFKKRKLRAKLNQTDAEPETPRCGGSSGFVGYGSRMGRSTVKGVSGFVSPLQKPEEPDFTVDE 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0258 753 Gene3D - 167 466 - -
Lele29g0258 753 SUPERFAMILY Voltage-gated potassium channels 141 464 - -
Lele29g0258 753 FunFam Cyclic nucleotide-gated ion channel 1 469 533 - -
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 205 214 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 505 512 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 411 428 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 322 332 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 437 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 PRINTS EAG/ELK/ERG potassium channel family signature 455 464 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele29g0258 753 SUPERFAMILY cAMP-binding domain-like 472 667 IPR018490 -
Lele29g0258 753 Gene3D Jelly Rolls 540 660 IPR014710 -
Lele29g0258 753 ProSiteProfiles cAMP/cGMP binding motif profile. 542 639 IPR000595 -
Lele29g0258 753 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 131 749 - -
Lele29g0258 753 CDD CAP_ED 542 673 IPR000595 -
Lele29g0258 753 Pfam Ion transport protein 150 469 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele29g0258 753 FunFam Cyclic nucleotide-gated ion channel 1 540 658 - -
Lele29g0258 753 Pfam Cyclic nucleotide-binding domain 565 652 IPR000595 -
Lele29g0258 753 Gene3D Helix hairpin bin 470 533 - -
Lele29g0258 753 SMART cnmp_10 542 673 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0258 Lele-ChrLele29 1509772 1514454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0258 116 752 Ion Channels AT2G28260 76.012 0.0 1021