Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0249 ATGAAGGAAGAAGCTGAGAAAAGCTTGGATCCACAACTATGGCACGCGTGCGCCGGAGGTATGGTTCAGATGCCATCTCTGAACTCCAAAGTCTTCTACTTTCCTCAAGGACACGCCGAGCACGCCCAGGCCGGCGTCGATTTTGCGGCCTCCTTGAGAATTCCAGCGCTCATTCTCTGCCGCGTGGCAGCCGTGAAATTCCTCGCAGACTCAGAAACCGATGAGGTCTTTGCCAAGATCAAGTTGATTCCTTTGAGAAACTCCGAGCTTGATGACGGCGACGGTGACGAAAACACTCACAGCTCTGAAAATTCGGAGAAGCCCGCTTCTTTTGCCAAGACCTTAACCCAGTCCGATGCTAACAATGGCGGAGGCTTCTCTGTTCCTAGATACTGTGCAGAGACCATATTCCCACGGCTGGATTACTCGGCGGAGCCCCCGGTTCAAACCGTGATTGCGAAGGACGTCCACGGGGAAGTTTGGAAGTTCAGGCATATCTACAGAGGGACACCTCGCCGTCACTTGCTGACAACAGGGTGGAGTACTTTCGTCAACCAGAAGAAACTCGTAGCAGGGGACTCCGTCGTGTTCCTGAGAGCCGAAAATGGCGATCTCTGTGTAGGGATTCGCCGTGCAAAGCGTGGGATCGGCGTTGGATCCGACGGCATCTCCGGTTGGAGCTCCGGTGCCGGGAACTGTGTGGGGCCTTATGGGTCTCTCAATGTGTTGTTAAGAGAAGAGAACAAGCTTCTGCGAAGCAATTCGAATGGTGGGAATTCAAATCCTGGGAGAGGAAAAGTGAGACCAGAATCTGTGATGGAAGCTGAGACACTCGCTGCTAGTGGTCAAGCGTTCGAGGTTGTTTATTACCCACGAGCAAGCACTCCTGAGTTCTGTGTGAAAGCTGAGGCTGTGAAGGCAGCCATGAGAATCCAATGGTGTTCTGGTATGAGATTCAAGATGGCCTTTGAGACAGAGGATTCTTCCAGAATTAGCTGGTTCATGGGCACTGTTGCTTCTGTTCAAGTTGTTGACCCTATTCGCTGGCCCAATTCTCCTTGGAGACTTCTTCAGGTTACTTGGGATGAGCCAGATTTGTTACAGAATGTGAAGAGGGTTAGTCCATGGTTGGTTGAACTGGTATCGAACAGGCCGGTGATCCCTCTCATGCCGTTCTCTCCCCCTCGGAAGAAGATGCGGCTTCCTCAACACCCAGACTTCCCCTTTGATGGTCACTTTACGATACCAATCTTCCCCGGCTGCAACCCTCTCGGGCCCACCAGCCCCTTGTGTTGTCTTTCCGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTCGGAATATCTCTTTCAAATCTCCACCTAAACCATAAGTTGCCGTTGGGGCTGCTTTCGAATAACATTCAGCAGCTTGATGTGCATCCCGGGATTTCTAATGGCAATATAATGATGAGCCATGACAAGAAAAACGAGAGCTTGTCATGCTTGCTTACCATGGGAAATTCTAACGAGATTTTAGAGAAATCTGATAATGCGAAGAGACACCAGTTTCTGCTTTTTGGACAGCCAATTCTGACTGAGCAACAAATTTCTCAAAGCTCTCATGCAGAAGTGTGGTCTCCGAACTTTAAGCGGAAAAATTCGCCGGATGAATTTAAGGATAAAGCAAAGAGCTTCTTGGGGGGATCCCAATCCGCGGTTTCGCAGCCAGGATTAACTTCTACAACCGACTTCTCTTGGCAACTCGGCTTGGATACAGGTCATTGCAAGGTTTTCCTGGAGTCAGAAGACGTGGGGCGCACTCTAGACCTTTCATGTCTCGGCTCTTATGAAGAGCTGTACCGGAAGCTGGCCGAAATGTTCGGACTCGAAAGATCCGAGATGCTGAGCCGTGTGCTCTACCAAGATGCTTCTGGTGCTCTCAAACGAACTGGAGAAGAACCCTTCTGTGACTTCATGAAAACAGCAAAAAGATTGACGATTCTGACGGATTCGGGCAGCAAAGACATTACGAGGGCGTGGATTACAGGATCTCGAAATGGAGATCTTGGACTGGACGCAGCATCAAACAAGACAGGCTTTCTGAGCATATTCGCCTGA 2109 0.5026 MKEEAEKSLDPQLWHACAGGMVQMPSLNSKVFYFPQGHAEHAQAGVDFAASLRIPALILCRVAAVKFLADSETDEVFAKIKLIPLRNSELDDGDGDENTHSSENSEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKRGIGVGSDGISGWSSGAGNCVGPYGSLNVLLREENKLLRSNSNGGNSNPGRGKVRPESVMEAETLAASGQAFEVVYYPRASTPEFCVKAEAVKAAMRIQWCSGMRFKMAFETEDSSRISWFMGTVASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNRPVIPLMPFSPPRKKMRLPQHPDFPFDGHFTIPIFPGCNPLGPTSPLCCLSDNAPAGIQGARHAQFGISLSNLHLNHKLPLGLLSNNIQQLDVHPGISNGNIMMSHDKKNESLSCLLTMGNSNEILEKSDNAKRHQFLLFGQPILTEQQISQSSHAEVWSPNFKRKNSPDEFKDKAKSFLGGSQSAVSQPGLTSTTDFSWQLGLDTGHCKVFLESEDVGRTLDLSCLGSYEELYRKLAEMFGLERSEMLSRVLYQDASGALKRTGEEPFCDFMKTAKRLTILTDSGSKDITRAWITGSRNGDLGLDAASNKTGFLSIFA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0249 702 Gene3D - 313 385 - -
Lele29g0249 702 Gene3D - 588 674 - -
Lele29g0249 702 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 669 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele29g0249 702 ProSiteProfiles PB1 domain profile. 589 669 IPR000270 GO:0005515
Lele29g0249 702 SMART B3_2 111 213 IPR003340 GO:0003677
Lele29g0249 702 FunFam Auxin response factor 109 213 - -
Lele29g0249 702 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Lele29g0249 702 MobiDBLite consensus disorder prediction 88 103 - -
Lele29g0249 702 Pfam Auxin response factor 276 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele29g0249 702 FunFam Auxin response factor 313 386 - -
Lele29g0249 702 SUPERFAMILY DNA-binding pseudobarrel domain 104 214 IPR015300 -
Lele29g0249 702 MobiDBLite consensus disorder prediction 88 110 - -
Lele29g0249 702 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Lele29g0249 702 CDD B3_DNA 110 211 IPR003340 GO:0003677
Lele29g0249 702 Gene3D - 109 213 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0249 Lele-ChrLele29 1450184 1453089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0249 1 674 B3 DNA Binding Superfamily AT4G30080 60.819 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele29g0249 B3 5.9e-22 CL0405