Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0245 ATGGCGATGGCTGTGGCTCGCCACAGAGAAAGCAGCAGCGGGAGCATCAGCAAGCACCTTGATTCCGGCAAGTATGTCCGATACACAGCGGAGCAAGTTGAAGCCCTCGAACGCGTTTATGCCGAGTGCCCGAAGCCCAGCTCCTTGCGAAGGCAACAACTGATCCGAGAGTGCACTATTCTCTCCAACATCGAGCCCAAGCAGATCAAAGTTTGGTTCCAAAATCGCAGGTGCAGAGAGAAGCAGAGAAAAGAGGCAGGATGTCTCCAGACGGTGAACAGGAAACTGTCCGCGATGAACAAGTTGTTGATGGAGGAAAATGAGCGGTTGCAAAAGCAGGTTTCCCAACTAGTATGCGAAAATGGGTTCATGAGGCAGCAATTGCATAGTGCGTCAGCAACAACTACTGATGCAAGTTGTGATTCGGTGGTCACCACCCCTCAACACTCCTTAAGAGATGCCAATAACCCTGCTGGACTCCTATCAATTGCTGATGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACTGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCTGTTGGGATCTTTGCCATTTCGCGAAGTTGCAGTGGAGTGGCAGCTCGAGCGTGCGGTCTTGTTAGTTTAGAACCTACAAAGATTGTGGAGATCCTAAAAGATCGTCCATCTTGGTTTCGCGACTGCCGGAGTCTTGAAGTATTTACAATGTTCCCTGCCGGTAATGGTGGGACAATTGAACTCATTTACACACAGACATATGCTCCAACTACATTGGCTCCGGCGCGGGATTTCTGGACTCTAAGATACACTACAAGTTTGGACAATGGAAGTCTTGTGGTTTGTGAGAGATCACTGTCTGGTTCAGGTGCTGGCCCTAATGCAGCGGCTGCTGCTCAGTTTGTGAGAGCTCAAATGCTTCCAAGCGGCTACCTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCATATTGTAGACCACTTAAATCTCGAGGCATGGAGTGTGCCAGAGGTTCTTAGACCCCTTTATGAATCATCAAAAATGGTTGCTCAAAAAATTACAATTGCCGCGCTACGCTATATAAGGCAAATAGCTCAGGAAACAAGTGGCGAAGTTGTTTATGGTTTAGGTAGGCAGCCTGCTGTTCTGCGGACTTTCAGCCAAAGGCTAAGCAGAGGTTTTAATGACGCTATCAATGGATTTAATGAGGATGGCTGGTCCATAATGAACTGTGATGGTGCTGAGGACGTGGTTATTACAGTCAACTCAACCAAGAATCTGTGTGCCACTTCTAATCCTGCAAGTTCCCTAACATTGCTTGGAGGAGTTCTCTGTGCAAAGGCTTCCATGTTGCTGCAGAATGTCCCTCCAGCAGTTTTGGTTCGGTTTTTGAGGGAGCATCGCTCTGAGTGGGCTGATTTCAATGTTGACGCCTATTCTGCTGCATCACTTAAAGCAGGCTCCTTTGCTTATCCTGGCATGAGGTCAACTAGATTCACGGGAAGTCAAATTATCATGCCTCTTGGCCATACAATTGAACATGAAGAGATGCTTGAAGTTGTTCGTCTTGAAGGCCAGTCTCTAGCTCCAGAAGAGGCTTTTGTTTCAAGGGACATTCATCTCTTACAGATATGTAGTGGGATTGATGAAAATGCTGTTGGGGCGTGTTCTGAGCTCGTATTTGCTTCAATTGATGAAATGTTCCCTGATGATGCTCCATTGTTGCCATCGGGTTTCCGCATCATCCCTTTGGATTCAAAATCAGGTGATAAGAAGAATGCAGTCTCTGTAAATCATACCCTAGACTTGACATCTGGTCTTGGTGTGGGCCCACCAACAAATCAAGCTGCAGATGTGTCATCTTGCAATAATAATACTCGGTCGGTGTTGACTATTGCCTTCCAATTTCCTTTTGAGAACAGCTTGCAGGAAAACGTTGCAATTATGGCACAACAGTATGTACGCAGTGTGATTTCATCTGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAGCCCACCCGTGGGACCAAAACTAAGTCCCGGTTCTCCTGAAGCCGTTACTCTAGCTCACTGGATATGCCAGAGTTATAGTTTCTATATGGGAGCAGAATTGCTTAGATCTGATTCGCTTGTTGGTGGTTTGTTGCTGAAACAATTATGGCATCATCAAGATGCCATTCTGTGTTGTTCAGTGAAGTCTGTGCCTGTGTTCATATTTGCAAACCAGGCAGGGCTTGACATGCTGGAAACAACCCTGGTAGCTTTGCAAGATATCACATTGGATAAAATATTTGACGACTCAGGACGCAAGGCTTTGTGTACAGAATTTGCCAAGTTGATGCAGGAGGGGTTCGCGTATCTGCCTGCTGGAATTTGCATGTCCATGATGGGACGGCATGTATCGTATGAACAAGCTGTCGCGTGGAAAGTTCTTTCTGAAGATAACAGTGTTCATTGCTTAGCTTTCTCTTTTATAAATTGGTCATTTGTATGA 2526 0.466 MAMAVARHRESSSGSISKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECTILSNIEPKQIKVWFQNRRCREKQRKEAGCLQTVNRKLSAMNKLLMEENERLQKQVSQLVCENGFMRQQLHSASATTTDASCDSVVTTPQHSLRDANNPAGLLSIADETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISRSCSGVAARACGLVSLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTTSLDNGSLVVCERSLSGSGAGPNAAAAAQFVRAQMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKMVAQKITIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAINGFNEDGWSIMNCDGAEDVVITVNSTKNLCATSNPASSLTLLGGVLCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSFAYPGMRSTRFTGSQIIMPLGHTIEHEEMLEVVRLEGQSLAPEEAFVSRDIHLLQICSGIDENAVGACSELVFASIDEMFPDDAPLLPSGFRIIPLDSKSGDKKNAVSVNHTLDLTSGLGVGPPTNQAADVSSCNNNTRSVLTIAFQFPFENSLQENVAIMAQQYVRSVISSVQRVAMAISPSGISPPVGPKLSPGSPEAVTLAHWICQSYSFYMGAELLRSDSLVGGLLLKQLWHHQDAILCCSVKSVPVFIFANQAGLDMLETTLVALQDITLDKIFDDSGRKALCTEFAKLMQEGFAYLPAGICMSMMGRHVSYEQAVAWKVLSEDNSVHCLAFSFINWSFV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0245 841 Pfam START domain 163 370 IPR002913 GO:0008289
Lele29g0245 841 CDD START_ArGLABRA2_like 157 373 - -
Lele29g0245 841 SMART HOX_1 21 87 IPR001356 GO:0003677
Lele29g0245 841 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Lele29g0245 841 Coils Coil 89 120 - -
Lele29g0245 841 SUPERFAMILY Homeodomain-like 22 86 IPR009057 -
Lele29g0245 841 Pfam MEKHLA domain 698 840 IPR013978 -
Lele29g0245 841 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Lele29g0245 841 FunFam Homeobox-leucine zipper protein REVOLUTA 24 79 - -
Lele29g0245 841 SUPERFAMILY Bet v1-like 162 374 - -
Lele29g0245 841 CDD bZIP 76 115 - -
Lele29g0245 841 SMART START_1 162 372 IPR002913 GO:0008289
Lele29g0245 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 20 841 IPR044830 GO:0003700
Lele29g0245 841 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Lele29g0245 841 Gene3D - 198 379 IPR023393 -
Lele29g0245 841 Gene3D - 16 87 - -
Lele29g0245 841 CDD homeodomain 24 84 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0245 Lele-ChrLele29 1420564 1426392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0245 1 841 Homeobox Transcription Factor Family AT5G60690 81.368 0.0 1433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele29g0245 START 1e-47 CL0209