Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0236 ATGCGATTGATCTGTTGGAAACAGTTACCCCTACTTATAGTGATTCAACTTCTATATCCCAACAAATCCAGCTACAAATCATATGCTGAAGCTTTGTTCACTTTCAAGATTGCCCTTGGCAGTCCACAGCAAAGCTCATGTAGTATTGCAAAATGTCCATGTCAAAGGCAAAGGGCTTGTCTTCACTTCCATGAACTAAAAGACCCAGGTGCTTTTCCTTTGTATAACGCGATACCAGCAAAGATAGACGGGACAAATGAAGTTCCAACACTCACACCTTTACAAGAAGCTCAAGTTAAAAGACCTGGAGGAACTAGGGTTGCTGCCATTGTTGGTGGTATTGCTGCTGCTTTAGTTGTGATTGTCATAGTAGTAATTGTTTACGCCTGTTTGATGCGTGTTAAAAGGTTTATAAGGCAAACATCTGAAACTGCTTCTTCTTCTCCATCTCCAACTGTTGAATTGGGAATAGCCAGCACCTCACAGGACATAAGGCAGTTCACAATCATGGAACTCGAACAAGCCACGAGGAATTTCAGTGGAAGTAACCTTGTAGGTGAAGGTAGATTTGGTTTGGTTTACAAGGGTTTACTTCAAGATGGATCTATTGTTGTCATAAAAAGGCGCCAATATGCTTTGACTCACAGTTTCATCCCTAAGGTGATGCAAATAGCTAACATTCACCACATTCATCTTGTCAAGCTTAAAGGTTATTATGAAGATGGCTATCAACAGTTACTTGTGCATGAATATCTTCCTAATGGAAATGTAGGAAATCACCTATATGATAATGAAGGTTTACCGATTGGAAGGTTAGATATGCAGCGAAGATTATCTACAGCTTTGGGTGCTTCCAAAGGATTGGAACATCTTCACCGCTTGGTTCCTCCTTTGGTTCACACAAATTTCAGAACTAGCAATGTTCTTGTGGATGAAAGCTTCACTGCCAAGGTTTCTGATTATGCACTCTGCAAGCTGCTAATAACTAATTCTAACCATGCTGCCTCATCCTCAAACACAGATTGCTTTCGTGACCCAGAGTTTAACCAATCGAAGGATTTCTCAAAGAAGAGTGATGTATACAGTTTTGGGGTCTTCTTACTTGAATTGATTAGTGGACGAGAAGTGCTTAACAGAAGCCTCTCAAACTCGCAAGAGAATCTGGTATTTCAGGTTAAGAACAGCCATGGCGTTTTGGAGGAGTTTGTGGACACAACACTAGGAAACAGAAGCCATGAAAAGCAAGCTGCGAAGAAGGTGATGAAGTTAGCGATGATGTGTTTAAACGAGAACATTACATTAAGACCATCGATGGGACAAATTGTAGGAGAGGTGGAGCAGATTCAAAGGGAATTTATTAGTGCTTTGCATTCTTACACCAGTGAGGAGATTTGTGGGGTCACTCTTGGGAGCGATCTCTTCAAGCGCAAAAGTTGCGAAGCATTCTTGAATCTGATTGACTTCAGGAGCCAAAAATTCAAAAAATCCCTTTCTTATTGTCAATTTTACCATTTAATAGATCTTACTCTCACACAGAGGAGCTTGAACACTCCCAGAATGCTCCTTCGGCGACTCGTCGTCTTTCTTTTCCTCACTACTCTTCTTCTCCTGTCCTCATTCTCTCTCACTTTATGCAAGACAGTCGAAAACGACAGCGACGACGAAGATCTCAGCTTTCTTGAAGAAGCTGATGATAGCTCTGCCTCCCACCATGAGTACCCAGATCTGGATCATTTCGAAGATGCTTCCGTTGGCGAAGATGATTTTGAGGACTTCTCCGGCTTCGACGAGTCGTATGCCGATGCGGAGGGATACAAAGAACCCGAGGTGGATGACAAAGATGTTGTTGTATTGAAGGAGAGTAATTTCAGTGACGTTGTGAAGAAAAATCAGTTTGTTATGGTGGAATTTTACGCGCCATGGTGTGGTCACTGCCAGGCTTTGGCTCCAGAGTATGCTGCCGCCGCCACCGAGTTGAAGGGCGAGAATGTGATTTTCGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCAGGAGTACGAAATTCAGGGATTCCCCACAGTCTATTTCTTTGTCGATGGGGTTCACAAGCCTTACAATGGCCAGAGGACCAAAGACGCTATAGTAACCTGGATTAAGAAGAAGATAGGACCCGGTCTTTCCAATATAACTACATTGGATGATGCCGAACGCCTATTGACCTCTGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGTGGGTCCTGAGAGTGAAGAGCTAGCTGCTGCATCCCGACTTGAGGATGATGTCAATTTTTATCAAACTGTTAATCCTGATGTGGCAAAGCTTTTCCATATTGACGCAAATGTCAAACGTCCTGCTTTGGTCCTCCTCAAGAAAGAGGATGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAATCTGCAATAGCAGAATTTGTGTTCTCGAACAAACTTCCGCTGGTCACAACTATTACAAGAGCAAGTGCCCCATCAGTTTTTGACAACCCAATCAAGAAACAGCTGTTGCTCTTTGTGACTTCAAATGATTCAGAGAAGTTACTCCTAGCATTCCAAGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGAACTGGATAATGAAGATGTTGGAAAGCCAGTTTCCGAATTCTTTGGCATCAGTGGGATTTCTCCAAAGGTACTTGCATACACTGGAAATGATGATGGAAAGAAATTTGTGCTTGATGGAGAAGTGACCGTTGACAAAATTAAGGCATTTGGGAATGATTTCCTTGAAGACAAGCTAAAACCTTTCTACAAGTCAGATCCAGTTCCTGAAAATAATGACGGGGATGTGAAAATAGTCGTTGGGGATAACTTTGACGAGATTGTCTTGGATGAGTCTAAGGATGTTCTCCTTGAGATTTATGCACCCTGGTGCGGCCATTGCCAAGCTCTGGAACCAACATACAATAAGCTTGCTAAACATCTGCGTGGCATTGAGTCTCTTGTCATAGTCAAGATGGACGGAACAACAAATGAGCATCCAAGGGCAAAGACTGATGGATTCCCCACCATTCTCTTCTTCCCAGCTGGAAACAAGAGTTTTGACCCTATTACCGTTGATACAGATCGTACAGTGGTAGCCTTTTATAAGTTCCTGAAGAAACATGCATCGGTCCCATTCAAGCTCCAGAAACCAACCACAAGTGCCAAATCCGCTGGTTCTGAATCCAAGGAGAGTCAGAGTGAGAGTAGCAGTAACGATGTGAAGGATGAATTGTGA 3288 0.427 MRLICWKQLPLLIVIQLLYPNKSSYKSYAEALFTFKIALGSPQQSSCSIAKCPCQRQRACLHFHELKDPGAFPLYNAIPAKIDGTNEVPTLTPLQEAQVKRPGGTRVAAIVGGIAAALVVIVIVVIVYACLMRVKRFIRQTSETASSSPSPTVELGIASTSQDIRQFTIMELEQATRNFSGSNLVGEGRFGLVYKGLLQDGSIVVIKRRQYALTHSFIPKVMQIANIHHIHLVKLKGYYEDGYQQLLVHEYLPNGNVGNHLYDNEGLPIGRLDMQRRLSTALGASKGLEHLHRLVPPLVHTNFRTSNVLVDESFTAKVSDYALCKLLITNSNHAASSSNTDCFRDPEFNQSKDFSKKSDVYSFGVFLLELISGREVLNRSLSNSQENLVFQVKNSHGVLEEFVDTTLGNRSHEKQAAKKVMKLAMMCLNENITLRPSMGQIVGEVEQIQREFISALHSYTSEEICGVTLGSDLFKRKSCEAFLNLIDFRSQKFKKSLSYCQFYHLIDLTLTQRSLNTPRMLLRRLVVFLFLTTLLLLSSFSLTLCKTVENDSDDEDLSFLEEADDSSASHHEYPDLDHFEDASVGEDDFEDFSGFDESYADAEGYKEPEVDDKDVVVLKESNFSDVVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVIFAKVDATEENELAQEYEIQGFPTVYFFVDGVHKPYNGQRTKDAIVTWIKKKIGPGLSNITTLDDAERLLTSENKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDANVKRPALVLLKKEDEKLNHFDGQFVKSAIAEFVFSNKLPLVTTITRASAPSVFDNPIKKQLLLFVTSNDSEKLLLAFQEAAKFFKGKLIFVHVELDNEDVGKPVSEFFGISGISPKVLAYTGNDDGKKFVLDGEVTVDKIKAFGNDFLEDKLKPFYKSDPVPENNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIVKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASVPFKLQKPTTSAKSAGSESKESQSESSSNDVKDEL 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0236 1095 MobiDBLite consensus disorder prediction 1067 1084 - -
Lele29g0236 1095 CDD PDI_b_family 722 820 - -
Lele29g0236 1095 Gene3D Glutaredoxin 948 1061 - -
Lele29g0236 1095 TIGRFAM pdi_dom: protein disulfide-isomerase domain 618 716 IPR005788 GO:0003756
Lele29g0236 1095 Gene3D Transferase(Phosphotransferase) domain 1 252 463 - -
Lele29g0236 1095 FunFam Protein disulfide-isomerase 822 947 - -
Lele29g0236 1095 ProSitePatterns Thioredoxin family active site. 973 991 IPR017937 -
Lele29g0236 1095 SUPERFAMILY Protein kinase-like (PK-like) 161 451 IPR011009 -
Lele29g0236 1095 ProSiteProfiles Thioredoxin domain profile. 601 718 IPR013766 -
Lele29g0236 1095 PRINTS Thioredoxin family signature 682 693 - -
Lele29g0236 1095 PRINTS Thioredoxin family signature 641 650 - -
Lele29g0236 1095 PRINTS Thioredoxin family signature 633 641 - -
Lele29g0236 1095 Pfam Thioredoxin-like domain 756 929 - -
Lele29g0236 1095 Gene3D Glutaredoxin 603 718 - -
Lele29g0236 1095 PANTHER PROTEIN DISULFIDE ISOMERASE 535 1092 - -
Lele29g0236 1095 SUPERFAMILY Thioredoxin-like 820 950 IPR036249 -
Lele29g0236 1095 SUPERFAMILY Thioredoxin-like 608 718 IPR036249 -
Lele29g0236 1095 CDD PDI_a_PDI_a'_C 953 1055 - -
Lele29g0236 1095 ProSiteProfiles Thioredoxin domain profile. 931 1060 IPR013766 -
Lele29g0236 1095 ProSitePatterns Thioredoxin family active site. 634 652 IPR017937 -
Lele29g0236 1095 CDD PDI_a_family 616 713 - -
Lele29g0236 1095 Pfam Protein tyrosine and serine/threonine kinase 184 443 IPR001245 GO:0004672|GO:0006468
Lele29g0236 1095 CDD PDI_b'_family 832 932 - -
Lele29g0236 1095 Gene3D Glutaredoxin 816 947 - -
Lele29g0236 1095 ProSiteProfiles Protein kinase domain profile. 179 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0236 1095 Gene3D Phosphorylase Kinase; domain 1 140 251 - -
Lele29g0236 1095 SUPERFAMILY Thioredoxin-like 947 1060 IPR036249 -
Lele29g0236 1095 MobiDBLite consensus disorder prediction 1067 1095 - -
Lele29g0236 1095 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Lele29g0236 1095 FunFam Predicted protein 601 719 - -
Lele29g0236 1095 SUPERFAMILY Thioredoxin-like 724 830 IPR036249 -
Lele29g0236 1095 TIGRFAM ER_PDI_fam: protein disulfide isomerase 613 1095 IPR005792 GO:0003756
Lele29g0236 1095 Gene3D Glutaredoxin 719 815 - -
Lele29g0236 1095 FunFam Protein disulfide-isomerase 948 1061 - -
Lele29g0236 1095 Pfam Thioredoxin 615 715 IPR013766 -
Lele29g0236 1095 Pfam Thioredoxin 953 1038 IPR013766 -
Lele29g0236 1095 FunFam protein disulfide-isomerase A2 720 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0236 Lele-ChrLele29 1364909 1371573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0236 167 442 Glycoside Hydrolase AT3G07070 39.236 1.48e-50 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele29g0236 PK_Tyr_Ser-Thr 8.8e-32 CL0016