Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0217 ATGGGGGAGGATCAGGATCAAGTAGTGCGCTTTAATCTTAACACATATCCACCTGGTTTTAGGTTCCATCCATCTGATGAGGAGCTCATTGGTCATTACTTGAAGAAGAAGAAGAAGATCAACTCGCTTTCACTTCCAGCAACTATTGCTGCTGAAATTTATCTTTATAAGTTTAACCCATGGGACCTACCTGAGAAAGCCTTGTTTGGAGAGGACGAGTGGTATTTCCTCAGCCCCAGAGATAGGAAATACACAAATGGGTTGAGGCCAAACAGGGCCGCAGCTTCTGGGTATTGA 297 0.4444 MGEDQDQVVRFNLNTYPPGFRFHPSDEELIGHYLKKKKKINSLSLPATIAAEIYLYKFNPWDLPEKALFGEDEWYFLSPRDRKYTNGLRPNRAAASGY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0217 98 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 98 - -
Lele29g0217 98 Gene3D NAC domain 25 98 IPR036093 GO:0003677|GO:0006355
Lele29g0217 98 ProSiteProfiles NAC domain profile. 16 98 IPR003441 GO:0003677|GO:0006355
Lele29g0217 98 SUPERFAMILY NAC domain 10 98 IPR036093 GO:0003677|GO:0006355
Lele29g0217 98 Pfam No apical meristem (NAM) protein 17 98 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0217 Lele-ChrLele29 1264491 1264864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0217 17 98 NAC Transcription Factor Family AT1G61110 73.171 3.00e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele29g0217 NAM 4.7e-21 No_clan