Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele29g0208 | ATGGTGTACGAGGCGAGTGCAAGAATAAGAGACCCAGTGTATGGTTGTGCGGGTGCGATTTGTCAGCTTCAGAAGCAAGTGAACGAGCTTCAGGCTCAGTTGGCTAAGGCTCAAGGCGAGCTTGTGAACATGCAAATGCAGCAAGCCAATCTGGTGGCACTTCTCTGCATGGAAATGGCGCAAACTAAGACTGAAACGTCTCCTTCAAGTACTCCTCCTCAGGAATATTATTCCTCACCGCCGTCATCATCATTCGAAGATACGAATTTCATTAATTCAAGCAACCTCAACTTCTTCGAGGAAAGCACTGGCCTTAACTCTTTGTGGGAGCAGCCACTTTGGACATGA | 348 | 0.477 | MVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQGELVNMQMQQANLVALLCMEMAQTKTETSPSSTPPQEYYSSPPSSSFEDTNFINSSNLNFFEESTGLNSLWEQPLWT | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele29g0208 | 115 | Pfam | Lateral organ boundaries (LOB) domain | 1 | 38 | IPR004883 | - | |
| Lele29g0208 | 115 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 79 | - | - | |
| Lele29g0208 | 115 | Coils | Coil | 20 | 47 | - | - | |
| Lele29g0208 | 115 | MobiDBLite | consensus disorder prediction | 62 | 84 | - | - | |
| Lele29g0208 | 115 | ProSiteProfiles | LOB domain profile. | 1 | 41 | IPR004883 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele29g0208 | Lele-ChrLele29 | 1210315 | 1210662 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele29g0208 | 1 | 115 | AS2 family | AT1G07900 | 49.573 | 2.46e-28 | 100 |
Transcription factors information