Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0205 ATGGGGAAAACACGTGGTATGGGAGCTGCTCGCAAATTGAGGTCCCACCGGAGAAGGCAAAGGTGGGCCGACAAGGCATACAAGAAATCCCATCTGGGTAATGAATGGAAGAAGCCGTTTGCTGGATCCTCTCATGCTAAAGGCATTGTTCTTGAAAAAATAAAGTGTGCTCGAGTGCAGTTGATCAAGAATGGGAAGAAGATTGCAGCCTTTGTGCCCAATGATGGTTGCTTGAACTACATTGAAGAAAATGACGAGGTGCTGATTGCTGGATTTGGTCGAAAAGGGCATGCTGTTGGAGATATCCCTGGAGTTCGATTCAAGGTTGTGAAGGTATCAGGAGTGTCCCTTTTGGCTCTCTTCAAAGAGAAAAAGGAGAAGCCCAGTAATTCTCATGAAAATTACCATTCAACGGAGCAATATAATAACCCCGAATGGTCTCAGACCTCAAAAGGATCTGGTGTTTTCCTCAAAAGTATTTGTGATGTAGAAGATTTTGACGTTCCTGGCGCAAGTAAGGCATATCTGGAGGAGTTGTGTTTTCCTTGGGAACGGGGAATTCTATAG 567 0.448 MGKTRGMGAARKLRSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPSNSHENYHSTEQYNNPEWSQTSKGSGVFLKSICDVEDFDVPGASKAYLEELCFPWERGIL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0205 188 FunFam 40S ribosomal protein S23 25 130 - -
Lele29g0205 188 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 128 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele29g0205 188 SUPERFAMILY Nucleic acid-binding proteins 20 130 IPR012340 -
Lele29g0205 188 MobiDBLite consensus disorder prediction 9 25 - -
Lele29g0205 188 Pfam Ribosomal protein S12/S23 31 128 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lele29g0205 188 Gene3D - 25 130 IPR012340 -
Lele29g0205 188 MobiDBLite consensus disorder prediction 134 148 - -
Lele29g0205 188 CDD Ribosomal_S23 26 127 IPR005680 GO:0003735|GO:0006412|GO:0015935
Lele29g0205 188 MobiDBLite consensus disorder prediction 1 25 - -
Lele29g0205 188 MobiDBLite consensus disorder prediction 128 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0205 Lele-ChrLele29 1187310 1189238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0205 1 128 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 86.429 8.22e-81 234