Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele29g0195 | ATGTTAGATCTTAATCTTAATGCGGATTCAACTCAGAACCAGGACTCCGTCATGTTCTTGGACAAATTTCCTGAAGCCTCGGCGAATCAAATGGCGGAATCGGGGACCTCTAATTCATCTGTTGTCAATGCCGACGGGTCCAGTACTGGAGGAGGCGATGATGACTCTTGCTCTACACGCGCTGGCGACGTAGTTACCTTCAATTTCAATATCCTTAAGGTGGATGGCGGTAACGACGTCGCAACCAGGGAGTTGTTTCTGGTGAGTGGAGCACAAGGAGTGGATGGCGACTCTGGGAATTGGCAGGGTCAGTCTTCATCGCCCTTTCCATCAAATAAGAGCTGGATGGATCTCTCATTCGATAGGCAAAATGGCAGCACGGAGGCAAAGATGATTCAACTTCAGCAGCAACCTAAGCCGCAGGTGAAGAAGAAGAGCAGGAGAGGTCCAAGGTCTCGGAGCTCCCAGTACAGAGGAGTCACCTTCTATAGGAGGACTGGAAGATGGGAATCGCACATCTGGGACTGCGGGAAACAAGTCTATTTGGGCGGTTTTGACACTGCACACGCCGCTGCTAGAGCCTACGATCGAGCTGCTATTAAATTCAGGGGAGTTGAAGCTGATATCAATTTCGACCTCAGTGATTATGAGGAGGATCTTAAACAGATGAAGAATCTCACCAAGGAGGAGTTTGTTCACATTCTTCGTCGCCAAAGTACTGGTTTCTCTAGGGGTAGCTCAAAATACCGGGGGGTAACACTGCACAGATGTGGACGCTGGGAAGCTCGGATGGGACAATTTCTTGGCAAAAAGGCTTACGATAAAGCCGCCATTAAGTGTAATGGAAGGGAGGCAGTAACTAACTTTGAGCCAAGTACTTATGAAGGGGAGTTGAATACTGAAGCGACCAATGAAGGTGTCAGTCACAATATTGACCTCAATTTAGGCATAGCAACCCCAGGCAAAGGTCCCAATGAAAGCAGGGGCAATCCTGAGCCCCAGTCTTTTCCTTACAATATGCATGCCAGAACAAGTTCAAGGATAGAGACCAACACCGACTCATTATTAATTGGTGATCAAGCTATGAAAAAGCTTGTAGTATCTGGAGATCGCGCTTCTATATGGAATGGGATATATCCAACTTTCTTTCCCAGTGAGGTGAATATCACTGTCTGGGCGTTTGGTGCTAAGCATCTATCTTGA | 1203 | 0.4755 | MLDLNLNADSTQNQDSVMFLDKFPEASANQMAESGTSNSSVVNADGSSTGGGDDDSCSTRAGDVVTFNFNILKVDGGNDVATRELFLVSGAQGVDGDSGNWQGQSSSPFPSNKSWMDLSFDRQNGSTEAKMIQLQQQPKPQVKKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFDLSDYEEDLKQMKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHRCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSTYEGELNTEATNEGVSHNIDLNLGIATPGKGPNESRGNPEPQSFPYNMHARTSSRIETNTDSLLIGDQAMKKLVVSGDRASIWNGIYPTFFPSEVNITVWAFGAKHLS | 400 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele29g0195 | 400 | CDD | AP2 | 247 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | CDD | AP2 | 156 | 214 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | Pfam | AP2 domain | 156 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | MobiDBLite | consensus disorder prediction | 29 | 56 | - | - | |
| Lele29g0195 | 400 | ProSiteProfiles | AP2/ERF domain profile. | 156 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | FunFam | AP2-like ethylene-responsive transcription factor | 155 | 214 | - | - | |
| Lele29g0195 | 400 | Gene3D | AP2/ERF domain | 247 | 291 | IPR036955 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | Gene3D | AP2/ERF domain | 155 | 214 | IPR036955 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | MobiDBLite | consensus disorder prediction | 132 | 157 | - | - | |
| Lele29g0195 | 400 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 120 | 327 | - | - | |
| Lele29g0195 | 400 | SUPERFAMILY | DNA-binding domain | 155 | 213 | IPR016177 | GO:0003677 | |
| Lele29g0195 | 400 | SUPERFAMILY | DNA-binding domain | 247 | 291 | IPR016177 | GO:0003677 | |
| Lele29g0195 | 400 | SMART | rav1_2 | 248 | 296 | IPR001471 | GO:0003700|GO:0006355 | |
| Lele29g0195 | 400 | SMART | rav1_2 | 156 | 218 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele29g0195 | Lele-ChrLele29 | 1130380 | 1132950 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele29g0195 | 1 | 271 | AP2-EREBP Transcription Factor Family | AT2G28550 | 63.860 | 1.25e-92 | 278 |
Transcription factors information