Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0190 ATGGGTTGTTTTCTCTGCACTCGCGAACCAGGCAACAAATCCAGCTCCATACCCCACAATTCCAGAACCCTCGTACGCTGCGATAAGACGACCAACCATTGCGCTACTGCAGATAAGGTAAAAGCAGACTCAAACGTGAATGTGAAAAAGGAAGTTATTTCCTCCAAGCCTGATCAAGAACTTTCTCCGGAGATGAAGGCCTTAAATTTAGAAGCTAAAATTCCAAAGGACGGAAAAGTTGATCTGAATCGTGCAACGTCGTTCTCGTTTGATGAGCTCGCAGCGGCGACAGGTCGTTTTAGGTCAGATTACTTGGTGGGCGAGGGAGGTTTTGGGAAAGTTTACAAGGGATACTTGAAGAGAATGAAGCAGGTGGCGGCTATAAAGCAACTGGACCCAGATGGCCATCAAGGGAAAAGGGAATTTGTGGTGGAAGTGTTAACACTGAGTATGGCAGACCACCCTAATCTGGTCAAACTCTTAGGATTCTGTGCCATGGGACAACAAAGATTGTTGGTTTATGAGTACATGCCATTGGGATCCCTCGAGAATCATCTCTATGTAGGGCCAAGCGGAGAAGACACTCATGTTTCGACTAGGGTTATGGGCACATTTGGGTATTGTGCTCCAGATTATGCCATGACTGGTCAATTAACTTTTAAGTCCGACATTTACAGCTTCGGTGTTGTTCTTTTGGAGCTTATCACCGGCAAAAAAGCTTTTGACATGTCAAGACCTGCCAAACAACAAAACCTCGTCTCTTGGGCAAGGCCAAAGTTCAAGGACAGGAAAAGATTCTCGGACATGGTGGATCCGTCGCTTAAAGGACATTATCCAGTGAGAGGATTGTACCAAGCTCTGGCTATCGCGGCCATGTGCGTGCAAGAGAAGCCTCATATGAGACCTGTTATTGCCGATGTGGTAACTGCTCTCAACTTCCTGGCTTCCCAGAAATATGATCCACACCATCAAGTTTCACACAAGCTCAAATCCAGGACAAATCATCATCAAGATCATGCTCATGATCTCTCTGGGTCTGACAGATCTGGGAACGAAGAAAATAATTCTGACTCAGACAGATCTGGTGGCACCTCCCAACAAAACAGTTATGAGACAGATAGATCTGAGAATGAAGGAAATAATTCTGACTCTGACAGATCTTGA 1164 0.4553 MGCFLCTREPGNKSSSIPHNSRTLVRCDKTTNHCATADKVKADSNVNVKKEVISSKPDQELSPEMKALNLEAKIPKDGKVDLNRATSFSFDELAAATGRFRSDYLVGEGGFGKVYKGYLKRMKQVAAIKQLDPDGHQGKREFVVEVLTLSMADHPNLVKLLGFCAMGQQRLLVYEYMPLGSLENHLYVGPSGEDTHVSTRVMGTFGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGKKAFDMSRPAKQQNLVSWARPKFKDRKRFSDMVDPSLKGHYPVRGLYQALAIAAMCVQEKPHMRPVIADVVTALNFLASQKYDPHHQVSHKLKSRTNHHQDHAHDLSGSDRSGNEENNSDSDRSGGTSQQNSYETDRSENEGNNSDSDRS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0190 387 PANTHER OS07G0668900 PROTEIN 188 324 - -
Lele29g0190 387 MobiDBLite consensus disorder prediction 322 387 - -
Lele29g0190 387 Pfam Protein tyrosine and serine/threonine kinase 105 187 IPR001245 GO:0004672|GO:0006468
Lele29g0190 387 Pfam Protein tyrosine and serine/threonine kinase 201 310 IPR001245 GO:0004672|GO:0006468
Lele29g0190 387 SUPERFAMILY Protein kinase-like (PK-like) 86 316 IPR011009 -
Lele29g0190 387 MobiDBLite consensus disorder prediction 356 375 - -
Lele29g0190 387 ProSiteProfiles Protein kinase domain profile. 100 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0190 387 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Lele29g0190 387 FunFam serine/threonine-protein kinase PBS1-like 66 176 - -
Lele29g0190 387 Gene3D Phosphorylase Kinase; domain 1 70 176 - -
Lele29g0190 387 Gene3D Transferase(Phosphotransferase) domain 1 180 340 - -
Lele29g0190 387 MobiDBLite consensus disorder prediction 335 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0190 Lele-ChrLele29 1080227 1083149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0190 188 316 Glycoside Hydrolase AT3G07070 60.465 2.05e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele29g0190 PK_Tyr_Ser-Thr 1e-06 CL0016