Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0182 ATGATGGATCGTCGAAGAATTGTCTTCTTCATCTGTGGCTTTTCAATTTTGCCGTTTCTATGCTTTTCTGCCAGCTTCGTTCCACAGGACAATTATCTTATAGACTGTGGAGCAGCTTCAAATACTTCATTTGATCGCCGCAATTTCGCGGCGGATTCATTCTACAAGGATCTCCTTTATACCAAACGTGATGTTCTCGCGACTTCCTCTTCAAAATCAGTCGCTTCCTCTGTCGATTCACCTCTCTATCAAACAGCAAGAATCTTCAGTGAACCGGCAAAGTACACATTCTCGATCAGCCAAAAGGGGAGACATTGGATCCGTCTCTATTTCTATCCATTCGAGTATCAGAACTTCGATATGAGTACTGCAAATTTTGCTGTCACTACCCCAAACAATATCTTTCTCACTAACTTCTCCGTGCAGAAAAATCTTGTCGTGAAGGAATACTCCGTGAATGTGACTTCAGACACCCTTGTGATCACCTTTACTCCTTCCAGCAATTCCATTGCGTTCATAAATGCCATTGAAGTTGTTTCAGTACCCGATGAACTCATTGCCGAGGACGCTTCCACCATAAATCCACGGGAAAGTTTCTCTGGCTTGGTGACCCTGGCATTTGAGACCGTTTGGAGGATTAACATGGGTGGCCCATCTATCTCCTCTGCAAATGATTCCCTTCACCGGATCTGGGTACCAGACCAAAATTTTCTTGTCAATCCTGACCTTGCTACCGATTTTACAAATATGGCTGCAGTTAACTATCTAGAAGGTGGGGCAACAGAGAATATTGCTCCACCTACAGTCTATGGTACTGCCACAGAAATGAACTCAAGCAGTGATCCACGTAGTAATTTCAATGTGACCTGGCAGTTTGATGTAGATCCAGGATTTCAGTATCTTGTTCGACTTCACTTTTGTGACATAGTTAGTAAAAGTCTCAACGAACTTTACTTCAACGTCTATGTCAACTCCTACATGGCAGAAAAAAATTTGGATCTCAGCACTTCCAGTAACAATGTTTTGGGTGCTCCAGTTTACAAGGATTATGTTACGGCCCCAACTGATGGCAAGAAAATTCGTGTAAGTGTCGGCCCTGCTTCTTTAGACAGTGCTTACCCGAATGCCATTTTAAATGGGCTGGAGATCATGAAAATGAGTAATTCTAAGGGCAGTCTGAGCGTAGGAACAGCTACAATTGGTACTGGTTCAACAAACTCAAAGAAGAAAGTAGCCATTATAGTGGGTGTGGTAGTTGGGACATTGTGTGCAGTGGTCATGGCTGGATTTTTCTTTGTATTGTGCAGAAGGAAACGTTTGACACGGCAAGGTCTTTCAAAGACATGGGTTCCCTTATCCATTAATGATGGAACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTACTTCCAACTTAGGGTATCGCATCCAATTTGCAGCAATTCAGGAGGCTACAAACAATTTTGATGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGAAAGTGTACAAGGGAGAACTAAATGATGGCACTAAGGTGGCAGTTAAGAGAGGGAATCCCCAGTCCCAGCAAGGGCTTGCAGAGTTCCATACAGAAATTGCAATGCTATCTCAGTTCCGTCATCGCCATTTGGTGTCATTGATAGGACCTGTAATAGACCCATCACTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCTACGCTCGCAGGGAAGATCAGACCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTGGATCGGCCTTCTATGGGGGATGTCTTGTGGAATTTGGAGTATGCCCTTCAGCTTCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAACATGATCGGTGAACTCTCTCCACAGATAAACAATTTCAACCACGATGCAAGTGTTTCCTCTGCTCAGCTTGAAGCTTCGGCCACGGATGACCTGTCTGGTGTTTCAATGAGTAGGGTTTTCTCACAGCTGGTGAAGTCTGAGGGGAGGTGA 2094 0.4389 MMDRRRIVFFICGFSILPFLCFSASFVPQDNYLIDCGAASNTSFDRRNFAADSFYKDLLYTKRDVLATSSSKSVASSVDSPLYQTARIFSEPAKYTFSISQKGRHWIRLYFYPFEYQNFDMSTANFAVTTPNNIFLTNFSVQKNLVVKEYSVNVTSDTLVITFTPSSNSIAFINAIEVVSVPDELIAEDASTINPRESFSGLVTLAFETVWRINMGGPSISSANDSLHRIWVPDQNFLVNPDLATDFTNMAAVNYLEGGATENIAPPTVYGTATEMNSSSDPRSNFNVTWQFDVDPGFQYLVRLHFCDIVSKSLNELYFNVYVNSYMAEKNLDLSTSSNNVLGAPVYKDYVTAPTDGKKIRVSVGPASLDSAYPNAILNGLEIMKMSNSKGSLSVGTATIGTGSTNSKKKVAIIVGVVVGTLCAVVMAGFFFVLCRRKRLTRQGLSKTWVPLSINDGTSHTMGSKYSNGTTLSATSNLGYRIQFAAIQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPQSQQGLAEFHTEIAMLSQFRHRHLVSLIGPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHDASVSSAQLEASATDDLSGVSMSRVFSQLVKSEGR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0182 697 Gene3D Transferase(Phosphotransferase) domain 1 558 650 - -
Lele29g0182 697 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Lele29g0182 697 Pfam Protein tyrosine and serine/threonine kinase 499 560 IPR001245 GO:0004672|GO:0006468
Lele29g0182 697 Pfam Malectin-like domain 34 386 IPR024788 -
Lele29g0182 697 PANTHER OS03G0124300 PROTEIN-RELATED 10 444 - -
Lele29g0182 697 SUPERFAMILY Protein kinase-like (PK-like) 469 561 IPR011009 -
Lele29g0182 697 ProSiteProfiles Protein kinase domain profile. 494 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0182 697 FunFam receptor-like protein kinase FERONIA 458 569 - -
Lele29g0182 697 FunFam Putative receptor-like protein kinase 31 182 - -
Lele29g0182 697 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Lele29g0182 697 Gene3D Phosphorylase Kinase; domain 1 456 557 - -
Lele29g0182 697 Gene3D - 30 181 - -
Lele29g0182 697 Gene3D - 205 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0182 Lele-ChrLele29 1030163 1032667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0182 556 697 Receptor kinase-like Gene Family AT3G46290 78.912 5.82e-71 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele29g0182 Malectin_like 2.1e-44 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0182 29 1030163 1032667 Lele09g1211 09 21036190 21038128 CCT
Lele29g0182 29 1030163 1032667 Lele31g1370 31 19544397 19547651 hybridization
Lele29g0182 29 1030163 1032667 Lele32g0172 32 993991 996495 hybridization