Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0181 ATGTCGGGTTTACTTAACTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGACAGTGCTGGTAGGTCATTTGCCACGTCATTCTCTGGCCAGTCTGGTGCTGCCTCCCCAGTTTTCCATCATAGTGGGGCTATGCAGGGATTGCACAACATCCACGGCAGCTTTAATGTTCCCAACATGCCGGGTACACTTGCATCAAGAAATTCAACAATAAATAGCATCCCGTCTGGAGGGGTTCAACAGCCTACTGGAGGCCTTTCTAGTGGAAGATTTGCATCAAATAATCTTCCTATTGCTTTGTCTCAGCTAACTCATGGAGGCTCTCATGGACATTCAGGAGTAACAAACAGAGGAGGTATAAGTGTTGTGGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGCGGTTCTATTCCTGGGATTCTTCCAACATCTGCTGCAATTGGTAACAGAAATACTGTTCCAGGTTTGGGGGTATCCCCAATTTTGGGAAATGCAGGTTCTCGAATTACAAGTTCTATGGGGAACATGGTTGGTGGAGGGAACATTGGGAGGAGCATTAGCTCTGCTGGAGGATTGTCTGTGCCTGGTCTTGCTTCTCGTCTAACTTTAAGTGCAAACAGTGGATCTGGGGGTTTAAGTGTGCAAGGACAGAATCGGTTGCTGAGTGGCATTCTTCCACAAGGATCACCCCAAGTTATTTCAGTGCTTGGAAATTCTTATCCTAGTGCTGGAGGCCCCCTTGGCCAAAGCCATGTTCAAGCAGTAAATAATTTGAACTCAATGGGGATGTTGAGTGATATGAACTCGAATGACATCTCCCCTTTTGACATCAATGACTTCCCTCAATTAACAAGTCGACCCAATTCTGCTGGAGGGCCCCAAGGACAGTTGGGTTCTTTGCGAAAACAGGGTCTTGGAGTTAGTCCCATTGTCCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTCAAAGGTGGCAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGAGAATGTTGTGTCCATGATGCAATCTCAGCATTTTCCTATGGGAAGGTCTTCTGGTTTCAGCTTAGGAGGGGCATATTCGTCACATCGATCACAGCAACAGCATGCTCCATCTGTCAGTAGTGTTGGTGTCTCCTTTTCATCTGCAAACAATCAGGAACTTCTCCACCTACATGGGTCAGATATATTTCCAGCATCGCATTCAACCTACAATTCCCAGACTAGTGGAGCTTCTGGCATTGGATTAAGGCCTCTTAATTCTCCGAATACTGTTTCTGGTATGGGATCATATGACCAGCTTATTCAGCAATACCAACAGCACCAGAACCAGTCCCAGTCACAGTTTCGTCTTCAACAAATGGCAACTGCAAATCAGTCTTTTAGGGATCAAGGCTTGAAATCCATGCAAACTTCCCAATCGACACCAGATCCATTTGGTTTGCTTGGTTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCACTTGGAATTGATCTTACTACACTTGGGTTAAATTTAAATTCATCAGAAAATCTTCATAAGACTTTTGGATCTCCATGGTCTGATGAACCGGCTAAGGGTGATCCAGAGTTCACTGTGCCACAATGTTATTATGCTAAACAGCCACCTGCCCTGAGTCATGGCTACTTTTCAAAGTTTACAGCAGAAACATTGTTTTACATATTTTACAGTATGCCCAAGGATGAAGCTCAGTTATACGCTGCAAATGAGCTTTACAATAGAGGCTGGTTGTATCACAAAGAACAGCATGTTTGGTTTATAAGAGTTCCTAACATGGAGCCACTCGTCAAAACAAACACTTATGAGAGGGGATCTTACCACTGCTTTGATCCGAACACATTTGAAACAATTCGTAAGGATAATTTTGTCGTTCATTATGAGTTGTTGGAAAAACCCACCCCTGCCTCATCATTGAGGGGGGAAGGGAAACTTGTGATGTAA 2025 0.438 MSGLLNSSLNGSASNLPDSAGRSFATSFSGQSGAASPVFHHSGAMQGLHNIHGSFNVPNMPGTLASRNSTINSIPSGGVQQPTGGLSSGRFASNNLPIALSQLTHGGSHGHSGVTNRGGISVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNTVPGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLSVPGLASRLTLSANSGSGGLSVQGQNRLLSGILPQGSPQVISVLGNSYPSAGGPLGQSHVQAVNNLNSMGMLSDMNSNDISPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHENVVSMMQSQHFPMGRSSGFSLGGAYSSHRSQQQHAPSVSSVGVSFSSANNQELLHLHGSDIFPASHSTYNSQTSGASGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQSQFRLQQMATANQSFRDQGLKSMQTSQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFTVPQCYYAKQPPALSHGYFSKFTAETLFYIFYSMPKDEAQLYAANELYNRGWLYHKEQHVWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETIRKDNFVVHYELLEKPTPASSLRGEGKLVM 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0181 674 MobiDBLite consensus disorder prediction 59 90 - -
Lele29g0181 674 Gene3D - 485 668 IPR038635 -
Lele29g0181 674 FunFam probable NOT transcription complex subunit VIP2 isoform X1 485 666 - -
Lele29g0181 674 Pfam NOT2 / NOT3 / NOT5 family 535 657 IPR007282 GO:0006355
Lele29g0181 674 PANTHER CCR4 NOT-RELATED 42 659 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0181 Lele-ChrLele29 1018552 1022318 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1220 11 19309342 19310226 Lele29g0181 29 1018552 1022318 CCT
Lele12g0100 12 840542 841029 Lele29g0181 29 1018552 1022318 CCT
Lele09g1222 09 21113395 21116350 Lele29g0181 29 1018552 1022318 CCT
Lele10g1197 10 23131388 23134648 Lele29g0181 29 1018552 1022318 CCT
Lele29g0181 29 1018552 1022318 Lele31g1372 31 19554612 19558379 hybridization
Lele29g0181 29 1018552 1022318 Lele32g0170 32 983394 988508 hybridization