Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0149 ATGGATCAGGGCGGTGAGAACAATGGGTCCACTGGGAGCAATGGAGGAGGAGGGGGTTCTCGATGGAACCCTACAAAAGAGCAAATAAATATGTTGGAGAATCTGTATAAGCAAGGGATAAGGACGCCCAGTGCTGAGCAGATTCAGCAAATAACTGCGAGGCTCAGGGTCTTTGGCCACATCGAAGGCAAGAATGTCTTCTATTGGTTTCAGAATCACAAAGCCAGGCAGCGACAGAAGCAGAAGCAAGAAACCTTTGCTTACTTCAATCGCTTTCTTCAACCCTCCCCTCATCACCATCCGCCTCTCTTCTCTCCCCCACTTTACCCTAATAATGGGCTATGTGCACCATATTATCTGCCACACAGTGAAATGGGGTTTGTTGCTCATCAGCATCCCAAAGTGCTTCTGGCAGGAGCAGGCATTAGGAAGACGGTGCCCAGAAACTGTGAGGTATATCAACAAATGCAGGACAATACCGTAATGTCGCGTGATGGGCACTTGAGAAACAAAGAAACGCTTGCGCTTTTCCCACTGCAGCCAACTGGTTTTCTCGAAGACAAAACTTCATTTTCTGTTGATGCTACTAATTCAGCTTCTGTTTCTCCGGCTCATCATCACAACGATGAAGAAGATGCCCCACCAGGAACCCAGCCTTTCTTTGATTTTCTTTCTTCTTCAGGCCAAGAGTTTCTGCATAGAAAGTAA 708 0.4703 MDQGGENNGSTGSNGGGGGSRWNPTKEQINMLENLYKQGIRTPSAEQIQQITARLRVFGHIEGKNVFYWFQNHKARQRQKQKQETFAYFNRFLQPSPHHHPPLFSPPLYPNNGLCAPYYLPHSEMGFVAHQHPKVLLAGAGIRKTVPRNCEVYQQMQDNTVMSRDGHLRNKETLALFPLQPTGFLEDKTSFSVDATNSASVSPAHHHNDEEDAPPGTQPFFDFLSSSGQEFLHRK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0149 235 FunFam WUSCHEL-related homeobox 4 19 86 - -
Lele29g0149 235 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
Lele29g0149 235 SMART HOX_1 17 84 IPR001356 GO:0003677
Lele29g0149 235 SUPERFAMILY Homeodomain-like 12 87 IPR009057 -
Lele29g0149 235 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 206 IPR044555 GO:0003700|GO:0099402
Lele29g0149 235 CDD homeodomain 21 81 IPR001356 GO:0003677
Lele29g0149 235 Gene3D - 19 88 - -
Lele29g0149 235 MobiDBLite consensus disorder prediction 1 25 - -
Lele29g0149 235 MobiDBLite consensus disorder prediction 196 220 - -
Lele29g0149 235 Pfam Homeodomain 20 79 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0149 Lele-ChrLele29 825606 826729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0149 15 225 Wox Gene Family AT5G59340 39.919 3.92e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele29g0149 Homeodomain 4.4e-19 CL0123