Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0146 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAATTGGCAGCCGCAACAAAATCATCAGCAATCAAATGGAACTGAAAGCACTCAGCTACTTCCTCATGCTGGTGGTTGCGGTGCAGGTTCGGTCCGGCCTGGTTCGATGTCCGACCGGGCCCGGCTAGCGAAGCTACCACCTCCAGAGGCAGCCCTAAAGTGTCCCCGTTGCGAATCCACCAACACAAAATTTTGCTACTTCAACAATTATAGCCTGTCTCAACCTCGTCACTTCTGCAAGACATGTCGACGATACTGGACAAGAGGCGGCGCTCTCAGGAACGTTCCGGTTGGAGGCGGATGCCGAAGAAACAAGAAGAGCAAAAGGAGCCGCTCAAAATCTCCGTCAGCCGCACCCACCACCGCTGACAACAAGCAGACCCTTCTCCCCAGCGCCGCCACCAGTGCAATCCCCACAGGCGCCGCCGCCACCGAGCTGATCGGTCAGTTGCAGCAACCTTCCAACTTGCCATTCATGGCTTCTTTACAAAACCTGGGCGGCCGTTACGGCTTAGGAAACATGGGCCTGAGCTTGCGTGACATTTTATCCCAGACTGAGCCCATGGGCTTTCAAATCGGAGGAGTAGACAACCAGTGGCGCTCACAGCAATTCCCTAATTTCATGAATGGGTTCGAGTCAAATAATTCAGTTGATTCTTCTTACCAGTTTCAAAGCGAGAGCATGGCCGTAGTACAGAACGGAGTGATCGGAGATTCAAGTTCTAGGGTTGCAACTCAGCTGCCACCTGTTAAATATGAAGAGAGTGGAGCCCTAAATTTGTCAAGAGCGCCCATAGGTAATAATAATAGTAATAATCAGTTCTATTCATGGACTGATTTGTCGGGTGTTGGTTCTTCTTCGACTAGCCACATCTTATCTTGTGTTTTCTCTCTCTATATATATGTGGCAGTCTTCTGCAATCTAGGTCACACTATAGAGCACCGGTTTTCGCCCACATATGAGCACGATAAAGCACAAAGAAGAAAAGTGAAACAGTACCGAACAATGTGCCACTCCACGTTAGCTTTTTGCTGA 1074 0.4935 MVFSSIPVYLDPPNWQPQQNHQQSNGTESTQLLPHAGGCGAGSVRPGSMSDRARLAKLPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRSRSKSPSAAPTTADNKQTLLPSAATSAIPTGAAATELIGQLQQPSNLPFMASLQNLGGRYGLGNMGLSLRDILSQTEPMGFQIGGVDNQWRSQQFPNFMNGFESNNSVDSSYQFQSESMAVVQNGVIGDSSSRVATQLPPVKYEESGALNLSRAPIGNNNSNNQFYSWTDLSGVGSSSTSHILSCVFSLYIYVAVFCNLGHTIEHRFSPTYEHDKAQRRKVKQYRTMCHSTLAFC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0146 357 MobiDBLite consensus disorder prediction 12 32 - -
Lele29g0146 357 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Lele29g0146 357 MobiDBLite consensus disorder prediction 110 138 - -
Lele29g0146 357 MobiDBLite consensus disorder prediction 12 52 - -
Lele29g0146 357 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 232 IPR045174 GO:0003700|GO:0006355
Lele29g0146 357 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Lele29g0146 357 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0146 Lele-ChrLele29 805075 806635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0146 34 290 C2C2-Dof Transcription Factor Family AT3G55370 43.321 3.45e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele29g0146 zf-Dof 1.4e-32 No_clan