Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0130 ATGGATCTTCACTTTGATGGAAGTCAATGTTTTATAAACGGTTGTAAACTTGATGATGGCGCCGCCAGCTCCGATTCAAACTATTTCCCATACCCAGCGAACGAGTGGGAACTCGACGAAAGCTATCGGAAACTTCTTAACTTCACAACCGATCCATTGTATCAACCTGGTGGGACTCCAGTGAGTTTTGCTAGCGTGAAATATGAAGCATCAGAGCGGTTAGTTTCATCCTCGCCTATAGACCCTGTAGGAGGCGTGTCAGATGTGGCGGCTGCCCCTACGACTTCGCCGCCACATCCTTCGCTGGAAGACGCTGACTTCTCAGAAACTATGAGGTACATAAGCCAGATACTCATGGAAGAGAACTTTGAACAGAAGCCTAGCATGTTTTATGATCCTTTGAGTCTACAAGTCACGGAGAAATCATTCTATGACGCTCTCAAAAAGGATCATCCTCTTTCCCCCAATCAGCATCCCCTAGACGTTCATCAGAATCTTGATAGCACAGATGACAACTGTTGTAGTAGTAACAACAGTAGTAGCACCAACAAGTCTCAGGATGCTAATAAGCTCTCTTCCTCCGATGCTCCATTTTCTGGTGATTATGCGTCCCAGTTAAATTTTCAACCCATCTCTCAGAAAGCTTCTCAACCTCCGAGTGCTTATACTTATATCAGCAACGGGTTGTCAGATGTGAATCCCTCTTTTACTAGGATCATGGCTCAAAATATCTTTACTGATGCAGAATCTGTTTCACAATTTAAAAGGGGGTTGGAAGAAGCCAGCAAGTTTCTTCCTAAAGGACTTCAACTTGTCACTGGTCTGGAGAGCAACAATGTGTTTCTAGAGTCAACGGGAGCGGCTAAAAAGGCATTAGGGAATATTCGGGAGAATTCATATGGATTAAAGGGTAGGAAGAATCATGAACGTGAAGTTAGTGACACAGAAGAAGGGAGAAGTAATAAGCATACGGCAGTGTATGTGGAGGAGAGTGATATATCTGAAATGTTTGATAAGGTGTTGCTTAGCGTCGAGAATGTTCCATTATGTGAGGAACACCACAAATGGATGCAGAATGGAACAGACAAGGCCAAAGAGCCAAGTGAACAGCCAAATTCATCCAATGGGGTGAAGACCCGCGGTAGGAGACAAGCCAGGAAGAAGGAAACCGTGGATTTGAGGACTCTGATGGCTCTGTGTACGCAAGCCGTGTCTGCAAATGACTGCAGAACTGCCAATGAATTGCTAAAGCAGATTAGGCAGCATTCTTCCAAACTTGGTGATGCGTCACAGAGGCTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCTTGTCTGGCTGTTGTACTGGAACCCATATATTCTATGCCTCTCTAAGCTCCAAGAGGATATCTGCTGCTAATATGTTGAGAGCTTACTCAGTTCTAATATCTGTCTGCCCTTTCAGGAAGTTTGCATATTTTTTTGCAAATCAGATGATTATGGAAGCAGCTGAAAAGGCGGAAACTCTTCATATAATCGACTTTGGCATTCAATATGGTTTCCAGTGGCCAATACTTATCAAGTTCCTTTCGCAAAGGACAGGTGGGCCTCCGAAGCTACGCATCACAGGGATAGAATTGCCCCAAGCTGGGTTTCGTCCCGCAGAATTAATAGAGGAGACCGGTCGACGTCTATCTAATTATTGCAAACGTTTTAATGTTCCGTTTGAATACGCGGCCATAGCATCACAAAACTGGGAAACCATCCCGTTTAAGGACTTTAAGATCGAGAGGAACGAACTGCTCGCCGTGAACTGTCTGTTGAGGCTTAAAAATTTGCTGGACGAGACGATTGAAGTAAAAAGTCCTAGAGATGCAGTTTTGGATTTGATCAGAAAGATGGATCCCGATATTTTTGTTCAATCCGTTGTCAATGGACCCTACAATGCCCCTTTCTTTGCCTCACGGTTCAAAGAGGCAGTATTCCATTATTCTGCGATGTATGATATGTTCGACACGGTCATACCCCGTGAAAATGAATGGAGGTTGATGGTTGAGAGAGAGTTTTTGGGTCGGGAGATCATGAACGTGGTAGCGTGCGAAGGGATCGAGAGGGTTGAGAGGCCCGAGACATACAAACACTGGCAAGTCAGGAATACGAGGGCCGGTTTCAGGCAGGTGCCACTGCCAGATGAGATGATGGTCAAATTCAACGAAAAGTTGAAGGCGTGGTATCACAGGGATTTTGTTATTGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATCATTTATGCTTCCACATGCTGGGTGCCATCGTAA 2313 0.4514 MDLHFDGSQCFINGCKLDDGAASSDSNYFPYPANEWELDESYRKLLNFTTDPLYQPGGTPVSFASVKYEASERLVSSSPIDPVGGVSDVAAAPTTSPPHPSLEDADFSETMRYISQILMEENFEQKPSMFYDPLSLQVTEKSFYDALKKDHPLSPNQHPLDVHQNLDSTDDNCCSSNNSSSTNKSQDANKLSSSDAPFSGDYASQLNFQPISQKASQPPSAYTYISNGLSDVNPSFTRIMAQNIFTDAESVSQFKRGLEEASKFLPKGLQLVTGLESNNVFLESTGAAKKALGNIRENSYGLKGRKNHEREVSDTEEGRSNKHTAVYVEESDISEMFDKVLLSVENVPLCEEHHKWMQNGTDKAKEPSEQPNSSNGVKTRGRRQARKKETVDLRTLMALCTQAVSANDCRTANELLKQIRQHSSKLGDASQRLAHYFANGLEARLSGCCTGTHIFYASLSSKRISAANMLRAYSVLISVCPFRKFAYFFANQMIMEAAEKAETLHIIDFGIQYGFQWPILIKFLSQRTGGPPKLRITGIELPQAGFRPAELIEETGRRLSNYCKRFNVPFEYAAIASQNWETIPFKDFKIERNELLAVNCLLRLKNLLDETIEVKSPRDAVLDLIRKMDPDIFVQSVVNGPYNAPFFASRFKEAVFHYSAMYDMFDTVIPRENEWRLMVEREFLGREIMNVVACEGIERVERPETYKHWQVRNTRAGFRQVPLPDEMMVKFNEKLKAWYHRDFVIDEDNNWMLQGWKGRIIYASTCWVPS 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0130 770 MobiDBLite consensus disorder prediction 304 323 - -
Lele29g0130 770 MobiDBLite consensus disorder prediction 158 196 - -
Lele29g0130 770 MobiDBLite consensus disorder prediction 363 379 - -
Lele29g0130 770 MobiDBLite consensus disorder prediction 359 388 - -
Lele29g0130 770 Coils Coil 412 432 - -
Lele29g0130 770 MobiDBLite consensus disorder prediction 149 196 - -
Lele29g0130 770 ProSiteProfiles GRAS family profile. 384 768 IPR005202 -
Lele29g0130 770 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 331 761 IPR005202 -
Lele29g0130 770 Pfam GRAS domain family 394 767 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0130 Lele-ChrLele29 727315 729627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0130 110 770 GRAS Transcription Factor Family AT1G07530 50.144 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele29g0130 GRAS 8.8e-112 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0130 29 727315 729627 Lele32g0123 32 700660 702996 hybridization