Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0129 ATGGATACTCTTCTGGAACACTTTCCTGGTAGCGTAAATGGATTTAGATTTGAAAATGGTCATATTTCAGAATTCCCGAACCAGAACCCCATAAACGGGTTTACACATGAAGATAAATCCGACGTTTCGTCCTTCTTTCCGACCAATTCAGAAATTCGTAGCGAGTCGGCTCTTTCTTCTAACACGAGCACGAACGAAGAATCGGAAGACAGTAACAAATATTCCAATCCGGCTCTCAGATTCATAAGTGAAATCCTCTTGGATGAAGAAGATGACCTGGAACGCAAGCCTTGCATGTTGCAAGATTGCTTAAAACTCCGGGCTGCTGAAAAGTCTTTCTACGATGCCCTCGGTAGCAGTTACCCCTCTTCTCCTCGTCAAACCTCTGATTGCTTCCATGGTGAGAACCCCGATAGCCCAGATGATCAAAACTTCTTTCCCAACCATAGTTTAGAGAGCAGCTGCAGCTATACCACTGATAATACATCTGACTCCGAATGGCCGAACGGTGTTGTTAATTCCCCGGAAAACATCCTCGGTATTTCAGATCTGCCTCCCGATCTACATGGAGGGACCCTTGATAGGAGCAATCTGCACCTAAATCTAGAGGATTCGATGCGCAATTCGGGATCCAGAGGAACAAGGGAAAAGAGAACCCATCGAATGGGTGATTCTATAAACGAAGAAGAGGGCAGAGGCAGCAAACTTTCTGCTGTCAGTTCAAACGATTCAGAGCCAACGGAAATGTTTGATGAAGTACTTCTCTGTAATCTCAGAACTAGTCAATCCTGGCCATGTGGCCCTGGACCATCTCAAAATGGCACATTCCATCTGAATGTTGACCCTTCTGGAGGATCAAACGGGAAGGCAACGCGTCCAAAGAAAGGGTCTAACAAAGGCGCAGCAGTAGATTTGTGGACTCTTCTAACCCAATGTGCTCAAGCTGTTGCAAGCTTTGACCAAAGGAATGCCAATGAGCTTCTCAAGCAGATTAGGCAGCATAGTTCCCCTTTTGGCGATGGGCTCGAACGTTTAGCTCATTACTTTGCCAATGGTCTTGAGACGCGTTTGGCTGCTGGGACACCATCATATAGCCCCCTCAATGACAATGGAGCAACTGCCGCTGAGATATTAAAAGCTTACAAACTGTACATCACGGCGTCTCCTTTCCTCAGGATCTCAAATTTCTTGGCTAACAGAACAATTCTGAAGCTGGTGGAAGGTGAAAATAACCTTCACATTATTGATTTTGGCATTTGCTATGGATTTCAATGGCCCTGCCTCATCCAGCGTCTTTCAGAAAGACAGGGTGGTCCTCCCAAGCTTCGTATCACAGGAATTGAGTTTCCTCAATCAGGTTTTCGGCCTGCAGAGAGGATTGAGGAGACAGGACGGAGGTTAGCAAACTACTGCAGGAGGTTCAACGTCCCTTTCGAATACAATTGCTTGGCACAGAATTGGGAAACCATCCAACTGGAGGATCTCAAGATCGACAGAACTGAAATAACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGCCTGATGAAACTGTGTCTGTCAACTGTCCAAGGGATGCTGTTTTGAAGCTGATAAGGACGATCAACCCAAATATGTTCATACATGGAGTTGTCAACGGCACCTACAATGCCCCATTTTTCGTCACTCGGTTCAGGGAGGCATTGTTCCACTACTCATCTTTGTTTGACATGTTTGAGGCCAATGTGCCCCGGGAAGATACAGAGAGGTTGTGGTTTGAGAAGGGGATCTTTGGAAGGGACGCCATGAATGTTATAGCCTGCGAGGGGGCAGAAAGGGTGGAGAGGCCAGAGACTTACAAGCAGTGGCGGGATAGGAATCGTAGAGCTGGGTTCAAGCAACTCCGCGTTGACGCACAAATCTTTAATAAAGCTCAAGAAATGGTGAAGACCGAATATCACAAGGATTTTGCGGTGGATGAGGATAGCAGGTGGGTTTTGCAGGGATGGAAAGGGCGTATCATTCATGCTCTTTCTATCTGGAAACCAGCTTAA 2034 0.4631 MDTLLEHFPGSVNGFRFENGHISEFPNQNPINGFTHEDKSDVSSFFPTNSEIRSESALSSNTSTNEESEDSNKYSNPALRFISEILLDEEDDLERKPCMLQDCLKLRAAEKSFYDALGSSYPSSPRQTSDCFHGENPDSPDDQNFFPNHSLESSCSYTTDNTSDSEWPNGVVNSPENILGISDLPPDLHGGTLDRSNLHLNLEDSMRNSGSRGTREKRTHRMGDSINEEEGRGSKLSAVSSNDSEPTEMFDEVLLCNLRTSQSWPCGPGPSQNGTFHLNVDPSGGSNGKATRPKKGSNKGAAVDLWTLLTQCAQAVASFDQRNANELLKQIRQHSSPFGDGLERLAHYFANGLETRLAAGTPSYSPLNDNGATAAEILKAYKLYITASPFLRISNFLANRTILKLVEGENNLHIIDFGICYGFQWPCLIQRLSERQGGPPKLRITGIEFPQSGFRPAERIEETGRRLANYCRRFNVPFEYNCLAQNWETIQLEDLKIDRTEITVVNCLYRLKNLPDETVSVNCPRDAVLKLIRTINPNMFIHGVVNGTYNAPFFVTRFREALFHYSSLFDMFEANVPREDTERLWFEKGIFGRDAMNVIACEGAERVERPETYKQWRDRNRRAGFKQLRVDAQIFNKAQEMVKTEYHKDFAVDEDSRWVLQGWKGRIIHALSIWKPA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0129 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 665 IPR005202 -
Lele29g0129 677 MobiDBLite consensus disorder prediction 118 134 - -
Lele29g0129 677 MobiDBLite consensus disorder prediction 45 73 - -
Lele29g0129 677 ProSiteProfiles GRAS family profile. 296 675 IPR005202 -
Lele29g0129 677 MobiDBLite consensus disorder prediction 266 293 - -
Lele29g0129 677 MobiDBLite consensus disorder prediction 266 298 - -
Lele29g0129 677 MobiDBLite consensus disorder prediction 118 168 - -
Lele29g0129 677 Pfam GRAS domain family 307 675 IPR005202 -
Lele29g0129 677 MobiDBLite consensus disorder prediction 141 168 - -
Lele29g0129 677 MobiDBLite consensus disorder prediction 199 244 - -
Lele29g0129 677 MobiDBLite consensus disorder prediction 209 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0129 Lele-ChrLele29 722532 724565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0129 8 676 GRAS Transcription Factor Family AT2G29060 43.931 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele29g0129 GRAS 7.5e-118 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0129 29 722532 724565 Lele31g1423 31 19831619 19833928 hybridization
Lele29g0129 29 722532 724565 Lele32g0122 32 694706 696736 hybridization