Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0127 ATGGACGACAAGTGGAAGGTGTCAAAGAAGGAAAGAGGTTCGATTTCAAGCAGCCAAGCGTGGGGCTCTACAAGGAGTGCCTCAACAAGAAGCTCTGCCACTTCTAACTCTCCTCTGCTTAGAAGTTTCTCTCACAAGATTCCTTCCTCTGCTTCGTCCTCCAACTCCAAGTCTGATCTTCCCAGAAGCTTCTCCCAAAAGAACTCCTCTATAGGTACAAAATGCACAAATTTAGCCAAGGAACACAAAGCCAGGTTTTACATCATGAGGCGCTGCATTGCCATATCAGGACCTGCAGTTGATCGGAGTGAAATCACGGATTTGCTGGTGAAGTTGGCTCTAATGCAATCTCGGGCCATTGTTCTCCATGTAAATCTTGATTCAGCATTTATGGTTTTCAATGTCGCACAGTATATTGGGATGACTGGGAATGTCTATGGTTCACTAGAAACAAGTTCTACAGGTAAGGAAGAAACTAATGAACTCATTGATTTTGATTCCTCAAATGTTGATGACGAAGTTGATTTTGGAGACATTGAAAATATGAGAATCCGTGGGAATATGTTCTATAAACTTGAAAAGAGTTCTAAAGAGTTTGGAGAATATAATCTAGAGTTTCACAGGAGGAAGAAATCTCCAAAGAAAGGAGATGATAAGAAGGAAAATTCTAAGAAAAAGAAAGCTAGCCAAAGTCCTAAAAACTTCCAAACTAATGTAACTGCTATGGAGAACAAGAAGCAGAGGACTCTTACTTTTAACCAGCTTACGGGTCCATATCATGAGCCATTTTGCTTGGATATATTCATATCAAAAGCCTCTGTTCGTGCTTGTGTTGTTCATAGGGTAACAAGCAAGGTTGTTGCTGTGGCTCATTCTATTTCAAAGGATATAAAGTTTGACTTCACTTCCACTAAGAACAAAAACACTTGTGCTGCTGTTAGGGGAATGTTAGCGTATGACATGCAAAACGCCAATCATTTGATCACATGGCGAGATGGTTAG 1002 0.4062 MDDKWKVSKKERGSISSSQAWGSTRSASTRSSATSNSPLLRSFSHKIPSSASSSNSKSDLPRSFSQKNSSIGTKCTNLAKEHKARFYIMRRCIAISGPAVDRSEITDLLVKLALMQSRAIVLHVNLDSAFMVFNVAQYIGMTGNVYGSLETSSTGKEETNELIDFDSSNVDDEVDFGDIENMRIRGNMFYKLEKSSKEFGEYNLEFHRRKKSPKKGDDKKENSKKKKASQSPKNFQTNVTAMENKKQRTLTFNQLTGPYHEPFCLDIFISKASVRACVVHRVTSKVVAVAHSISKDIKFDFTSTKNKNTCAAVRGMLAYDMQNANHLITWRDG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0127 333 Gene3D - 239 327 - -
Lele29g0127 333 MobiDBLite consensus disorder prediction 209 228 - -
Lele29g0127 333 Gene3D - 43 174 - -
Lele29g0127 333 Pfam DVL family 80 94 IPR012552 GO:0008285
Lele29g0127 333 MobiDBLite consensus disorder prediction 12 69 - -
Lele29g0127 333 MobiDBLite consensus disorder prediction 1 69 - -
Lele29g0127 333 SUPERFAMILY Translational machinery components 255 319 - -
Lele29g0127 333 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 182 318 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lele29g0127 333 CDD Ribosomal_L18_L5e 259 318 - -
Lele29g0127 333 MobiDBLite consensus disorder prediction 209 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0127 Lele-ChrLele29 705280 708192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0127 99 151 Ion Channels AT1G42540 43.396 2.63e-08 53.5