Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele29g0110 | ATGGAGTCTGAAGATCAGACAACATCATCAGAAACAAAGGCAAACGATGAGCAAGGAGCGAGTCAAGTGACAAGGTCGTACGAGTGCAGCTTCTGTAAAAGGGGATTCTCTAATGCACAAGCACTGGGAGGCCACATGAACATTCACAGGAAAGACAAAGCCAAGATCAAGCAATCTTCTTCCAATTCAACCCATCGTCATCGCCATCGTCATCAACCATCTTTGGATGTTCACCGTAAGGTCGAAGACAGAACCAGCTCAGCTTACTGGCCTAGCAGCAGGAATATGGAAGATTCGTCTTCCAGAGACGAAACCTGCGAAGAACTTGGCATAAAGCAGCTTCCTTTATTTGCAGAAACACCAAGTGGCGAAGAATTAGGTCGTGTTCATGATAGAAGAGGAATTTCTGAAGAGATGAAGAGTTCGCCTTCGGATTTAGACCTTGAACTCAGACTAGGGCCTGACCCACCCTCTCCCACTATTGGTACCCGGAAATTCTTTTGA | 504 | 0.4623 | MESEDQTTSSETKANDEQGASQVTRSYECSFCKRGFSNAQALGGHMNIHRKDKAKIKQSSSNSTHRHRHRHQPSLDVHRKVEDRTSSAYWPSSRNMEDSSSRDETCEELGIKQLPLFAETPSGEELGRVHDRRGISEEMKSSPSDLDLELRLGPDPPSPTIGTRKFF | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele29g0110 | 167 | MobiDBLite | consensus disorder prediction | 40 | 167 | - | - | |
Lele29g0110 | 167 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Lele29g0110 | 167 | Gene3D | Classic Zinc Finger | 3 | 88 | - | - | |
Lele29g0110 | 167 | MobiDBLite | consensus disorder prediction | 60 | 74 | - | - | |
Lele29g0110 | 167 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 29 | 49 | IPR013087 | - | |
Lele29g0110 | 167 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 27 | 54 | IPR013087 | - | |
Lele29g0110 | 167 | PANTHER | OS07G0101800 PROTEIN | 1 | 156 | - | - | |
Lele29g0110 | 167 | SUPERFAMILY | beta-beta-alpha zinc fingers | 25 | 54 | IPR036236 | - | |
Lele29g0110 | 167 | SMART | c2h2final6 | 27 | 49 | IPR013087 | - | |
Lele29g0110 | 167 | Pfam | C2H2-type zinc finger | 27 | 51 | - | - | |
Lele29g0110 | 167 | MobiDBLite | consensus disorder prediction | 124 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele29g0110 | Lele-ChrLele29 | 656693 | 657196 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele29g0110 | 24 | 163 | C2H2 Transcription Factor Family | AT3G53820 | 36.842 | 3.01e-18 | 75.1 |