Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0107 ATGGCAGGTGCAGCCCAGGCGGTCCAAAACCCTTCTCAACCGGCGAAACTACGATGGGGCGAACTAGATGAGGATGACGGCGAGGATCTTGATTTTTTGCTGCCGCCTCAACAGGTGATTGGCCCCGATGAGAACGGCATAAAGAAGGTCATAGAGTACAAATTCAACGAAGATGGCAATAAGGTGAAGATCACTACCACCACTCGTACTCGCAAGCTTGCTAACGCTCGCCTCAGTAAGCGAGCCGTTGAAAGGCGATCCTGGGCCAAGTTCGGCGACGCCGTTCACGAAGATGTTGGTAGCAGGCTTACTATGGTGTCCACCGAAGAGATCCTCCTTGAGCGACCTAGGGCTCCAGGTAGCAAACCAGAAGAACCGAAGGCTGCTGGAGACCCGTTGGCTCAATTCCAAAAAGGTGCTGTTCTCATGGTTTGTAGAACTTGTGGGAAGAAGGGAGATCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCCCAGCCAATGGAAGGATTCATTGATAAGCCTGCTACATCAGAAGTTGCCACCGCCCCTTCTGGTCCAACCAAGGGAGCATATGTTCCTCCTGGTCTGAGAGCAGGTGCAGAGAGAACTGGTGGATCAGACATGCGGCGACGGAATGATGAAAATTCTGTACGGGTCACTAATCTATCTGAGGATACAAGAGAGCCTGACTTGCTTGAACTATTCCGTCCTTTTGGTGCTGTAAGCAGAGTGTATGTTGCTGTTGATCAGAAGACTGGCATTAGCAGAGGATTTGGCTTTGTTAACTTTGTGAACAGGGAAGACGCCCAGAGAGCAATTAACAAGCTGAATGGATATGGTTATGACAATCTCATCCTTAGAGTTGAATGGGCCACTCCAAGAACGAACTAA 894 0.4978 MAGAAQAVQNPSQPAKLRWGELDEDDGEDLDFLLPPQQVIGPDENGIKKVIEYKFNEDGNKVKITTTTRTRKLANARLSKRAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKAAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPMEGFIDKPATSEVATAPSGPTKGAYVPPGLRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGISRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0107 297 CDD RRM_eIF3G_like 217 292 IPR034240 -
Lele29g0107 297 Pfam Eukaryotic translation initiation factor 3 subunit G 38 164 IPR024675 -
Lele29g0107 297 SMART rrm1_1 217 290 IPR000504 GO:0003723
Lele29g0107 297 PIRSF Transl_init_eIF-3_RNA-bind 8 297 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lele29g0107 297 MobiDBLite consensus disorder prediction 178 216 - -
Lele29g0107 297 Gene3D - 189 297 IPR012677 -
Lele29g0107 297 CDD eIF3G 45 163 IPR024675 -
Lele29g0107 297 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 218 284 IPR000504 GO:0003723
Lele29g0107 297 FunFam Eukaryotic translation initiation factor 3 subunit G 180 297 - -
Lele29g0107 297 SUPERFAMILY RNA-binding domain, RBD 214 296 IPR035979 GO:0003676
Lele29g0107 297 MobiDBLite consensus disorder prediction 1 21 - -
Lele29g0107 297 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 216 294 IPR000504 GO:0003723
Lele29g0107 297 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 16 296 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lele29g0107 297 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 23 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0107 Lele-ChrLele29 642788 645015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0107 8 295 Eukaryotic Initiation Factors Gene Family AT3G11400 68.966 1.69e-156 437