Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0104 ATGACCAGTTTGTTGAAGCAGATGGAACATGAAACAACTCCCGTCCTAGAAGCAAGTTCCTCGCAGGAAATAGAGATGCCAGTTGCCTCCGAAATAATTGATATTCTTCCCGCGGCAACGGAGTCATCTTGCAGTTCTGTTTGCCCTTTTTCTAGACGAGAACATAGTTTTATGGCATCAGAAGAGTCATCAAAGTCGACAAAGAAACTCTGTGGACTCATAGTTTTCTATGCAATGGTTATGCTTGTGGAAGTTGTTGGTGGTTTGAAAGCCAACAGCCTAGCCGTTATCAGCGATGCTGCGCATTTGCTTTCAGATATTGCTGGATTCTCTATCTCTCTCTTTGCAGTATGGGCATCTCGCTGGGAGGCAACTCCACATCAATCTTTTGGATACAATAGGCTCGAGGTCCTGGGTGCTCTTCTTTCTGTGCAGTTAATTTGGCTAATATCTGGCTTTTTAATATATGAAGCACTTGGGAGACTTCTTTACAGAAAGCCCCGTGTGAATGGAATGCTCATGCTTTCAATTGCAGCATTTGGGTTTGTTCTTAACTTAATTATGGTTTTATGGCTTGGTCATGATCACAGTCACCATCACCATCACCATCATGTATGTGAAGGCTCTAATCATGATCATGGTGGAAAGGAGGAGCAGCATAATAACATAACAGATGAAGAGGAGCTTAGTCTAGTTTCAACTAGTCCTAGAAAAAGAAATGTACTGAACATAAATTTGCAGGGGGCCTATCTGCATGTCATGGCTGATCTGATTCAAACCGTGGGGGTGATGATTGCTGGAGCTGTAATATGGGCCAAACCAGATTGGTTAGTGGTTGACCTGTTGTGTACTCTAATATTCTGTGTTATATCTCTGGGAACTACAGTGTCCATGCTCAATAATATTTACGGCATTCTGATGGAGAGGACACCGAGTGAGATCGATATCGTGAAGCTGGAAAGTGACCTCAAGGGGATCAAGGGAGTGCAAGATATCCATGACCTGCACATTTGGGCCATAACTGTTGGAAAAAATGTTCTTTCTTGTCATGTAGTAGCCGAGCCTGCGATCAGTTCCCCTGATTTGCTCAACAGGATTAGGCATTACTGTGAAAAAGCACACAAAATTCATCATGTAACTATACAAATTGAGTGA 1155 0.4277 MTSLLKQMEHETTPVLEASSSQEIEMPVASEIIDILPAATESSCSSVCPFSRREHSFMASEESSKSTKKLCGLIVFYAMVMLVEVVGGLKANSLAVISDAAHLLSDIAGFSISLFAVWASRWEATPHQSFGYNRLEVLGALLSVQLIWLISGFLIYEALGRLLYRKPRVNGMLMLSIAAFGFVLNLIMVLWLGHDHSHHHHHHHVCEGSNHDHGGKEEQHNNITDEEELSLVSTSPRKRNVLNINLQGAYLHVMADLIQTVGVMIAGAVIWAKPDWLVVDLLCTLIFCVISLGTTVSMLNNIYGILMERTPSEIDIVKLESDLKGIKGVQDIHDLHIWAITVGKNVLSCHVVAEPAISSPDLLNRIRHYCEKAHKIHHVTIQIE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0104 384 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 41 384 - -
Lele29g0104 384 MobiDBLite consensus disorder prediction 203 229 - -
Lele29g0104 384 SUPERFAMILY Cation efflux protein transmembrane domain-like 65 308 IPR027469 -
Lele29g0104 384 Gene3D Cation efflux protein transmembrane domain 67 306 IPR027469 -
Lele29g0104 384 TIGRFAM CDF: cation diffusion facilitator family transporter 68 384 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele29g0104 384 MobiDBLite consensus disorder prediction 207 225 - -
Lele29g0104 384 MobiDBLite consensus disorder prediction 1 20 - -
Lele29g0104 384 Pfam Cation efflux family 74 306 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele29g0104 384 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 311 384 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0104 Lele-ChrLele29 626906 628060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0104 8 384 Inorganic Solute Cotransporters AT2G29410 49.081 3.89e-120 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0104 29 626906 628060 Lele31g1446 31 19932894 19934057 hybridization
Lele29g0104 29 626906 628060 Lele32g0104 32 600186 601115 hybridization