Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0090 ATGTCTAAAGTCTTGATTTCACTAATAATAATAATCAAAATAGGACTGTCCTTGGAGCCACTGATCGGAGCAGTAGCAGCCGGCAACACGGTAGCCCTCAAGCCTTCAGAGCTATCCTCTGCAAGTGCTTCTCTGCTGGCCTCTGGCCTCCCAGATTACTTGGACAACAGAGCCATTAGGGTCGTTCAAGGAGTCCAAGAAGTGGACGAGCAATTACTTCTCCAAAAATGGGACAAAATCTTCTTCCCTGAAGTATCTCATGTTCAATTTATTCAAGTGGCTGCAAAACGAATTATCGTGGGAAAATTTGGGACCTGCGCCGGTCAAGCATGCATAGCAATCGATTATATTCTTGTTGAAAAGGAATTCGCTTCAACATTGGTGGAACTGATGAAGCTGGATAAGGTTGAAGATAATAGCATCAAATTCATAAACTCGAGGCCTAAGCCTCTTGCCCTCTACGTGTTCACCAACAGCCAAACCCTTCAGGGAACAATGGAGTCCGAAACATCACCGGGAAGTGTGACGCTCAACGATTCAATTCTTCAATATGCGGCCGATAGCTTGCCATTTGAAGGAGTTGGGGAAAGTGGGTTTGGGAACTACCATGGGAAGTTCTCATTCGAGGCATTCAGCCACAAGAAGGGAATAGTGAGGAGAAGCTTCCTCACAGATTTCTGGTTTCAGTAA 690 0.4536 MSKVLISLIIIIKIGLSLEPLIGAVAAGNTVALKPSELSSASASLLASGLPDYLDNRAIRVVQGVQEVDEQLLLQKWDKIFFPEVSHVQFIQVAAKRIIVGKFGTCAGQACIAIDYILVEKEFASTLVELMKLDKVEDNSIKFINSRPKPLALYVFTNSQTLQGTMESETSPGSVTLNDSILQYAADSLPFEGVGESGFGNYHGKFSFEAFSHKKGIVRRSFLTDFWFQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0090 229 SUPERFAMILY ALDH-like 18 225 IPR016161 GO:0016491
Lele29g0090 229 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 82 IPR016162 GO:0016491
Lele29g0090 229 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 198 215 IPR016162 GO:0016491
Lele29g0090 229 PANTHER ALDEHYDE DEHYDROGENASE 13 83 IPR012394 GO:0006081
Lele29g0090 229 Pfam Aldehyde dehydrogenase family 17 73 IPR015590 GO:0016491
Lele29g0090 229 Pfam Aldehyde dehydrogenase family 131 215 IPR015590 GO:0016491
Lele29g0090 229 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 137 197 IPR016163 GO:0016620
Lele29g0090 229 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 91 132 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0090 Lele-ChrLele29 530691 532285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0090 114 226 Aldehyde Dehydrogenase Gene Family AT4G36250 46.018 3.81e-29 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0090 29 530691 532285 Lele31g1459 31 20014906 20018506 hybridization
Lele29g0090 29 530691 532285 Lele32g0088 32 515223 518009 hybridization