Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0085 ATGAACACATTGCTTGCTCGGACTCATCGATGCGACGCTGAGCCTATAGATCGGCCTCAAGGTTTCATTTCCCGCAATTTTCTTTTTCTTCCTGGCCATCAGGTTAGATTATGTTTTGCGATATTTTACTGGACGGCTCGTGCATCGAAAGTTGAGAAAAGATGGACCATGACAGGACTGGATGTCAAGCTCCTCCAGAGGGAGCAGGCCAATCTTGCGGCATCGTCCATTGGGAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTTCTTCAAATGTGGATATCCTAGTCAATTCACTAGAGCCTAAAACTACATCCGAAGAACCTTTTTTGGCTTCAGTCTCAAAGGAGAGTGGTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAGCAGCTGCAATAAGCGGGTTGGTTTGACAGGGTTCAGTTGTCGGTGTGGTAACCTTTTCTGTTCTGCACACCGCTACTCAGACAAGCATGATTGCTCCTTTGATTACCGCACTGCTGCAAGGGATGCCATAGCTAAAGCAAACCCAATTGTTAAGGCTGAAAAGCTTGATAAGATCTAG 585 0.465 MNTLLARTHRCDAEPIDRPQGFISRNFLFLPGHQVRLCFAIFYWTARASKVEKRWTMTGLDVKLLQREQANLAASSIGNIMNGSSSSSGNEPVVSSNVDILVNSLEPKTTSEEPFLASVSKESGEAKPKDGPKRCSSCNKRVGLTGFSCRCGNLFCSAHRYSDKHDCSFDYRTAARDAIAKANPIVKAEKLDKI 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0085 194 PANTHER AN1-TYPE ZINC FINGER PROTEIN 87 194 - -
Lele29g0085 194 MobiDBLite consensus disorder prediction 112 134 - -
Lele29g0085 194 FunFam Zinc finger AN1-type containing 6 108 190 - -
Lele29g0085 194 Gene3D - 109 190 IPR035896 -
Lele29g0085 194 ProSiteProfiles Zinc finger AN1-type profile. 129 175 IPR000058 GO:0008270
Lele29g0085 194 SMART AN1_Zf_4 135 172 IPR000058 GO:0008270
Lele29g0085 194 SUPERFAMILY AN1-like Zinc finger 119 189 IPR035896 -
Lele29g0085 194 Pfam AN1-like Zinc finger 135 171 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0085 Lele-ChrLele29 502914 505507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0085 117 194 C2H2 Transcription Factor Family AT3G52800 55.128 9.46e-28 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0085 29 502914 505507 Lele31g1464 31 20043885 20046510 hybridization
Lele29g0085 29 502914 505507 Lele32g0083 32 486203 486721 hybridization