Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0083 ATGAATACGCATGGCAGCAACGTTAATGAGGTTCCGAAGGTTGCAGATTTTCTAGGAGTGGGAAAGTCTGAGAATCAGTCGGATCTTGCAGCCTTTAACGAAATTCAGTCAAATGATTCGGGTTACCTATTCACAAACAGCAGTCTGGTGCCGATGCAAAGCTCAGTGGTGGACACATCTGGCAACTTCGAGTATCAAGAAAACAATGCCAACTCGAACCTGCAGTCTTTGACATTATCCATGGGCAGTGGTAAGGATTCTATCTGTGAAACTAGTGGCGACAACAGTACTAATACTGCGGTTGAACCTGCTGCACCTCGCAGAACTTTAGATACATTCGGTCAGAGAACATCAATTTATCGAGGTGTAACCAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGACAATAGTTGTAGAAGAGAAGGACAATCACGAAAGGGACGCCAAGGTGGATATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCGGCACTAAAGTACTGGGGAACATCAACAACTACCAACTTTCCAATCAGTAACTATGAGAAGGAACTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTGGCCGCCATACGAAGGAAGAGCAGTGGGTTCTCTAGGGGTGCATCAATGTATCGCGGAGTCACAAGGCATCATCAACATGGCAGATGGCAGGCAAGGATCGGTAGAGTTGCGGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCGGCGATCAAGTTCAGAGGACTAAACGCAGTGACAAACTTCGACATGAGCCGTTACGACGTGAAAGCCATACTTGAGAGCAACACGCTTCCAATCGGAGGAGGAGCTGCTAAACGACTGAAGGAAGCTCAGGCTCTGGAATGTTCTAGAAAAAGAGAGGAAATGATAGCGCTTGGATCGAGCTTTCAGTACGGCAGCGGCAGCTCTAGCAGGCTCCAACTACAAGCCTACCCACTGATGCAGTTAGATCAGACGCAACCATTGTTAAGCCTACAGAACCAAGAGATATCTCAGTACTCGTCACTTCATCATCCCAGTTATATCCAAACCCAGCTTCAGTTGCACCATCAAACTGGTTCTTCTAACTATAACTTTCACCAATCGCCCAGCAATAACGCTCAGTTGTACAATAGCTATCTTCAGAACCACCCGGCTCTGCTTCAGGGTTTGATGAACATGGGTTCTTGTTCTTCTTCTGTGATGGACAACGATGGAGGGTCTAGTGGGAGTTACAGTGGAGGAGTAGGAGGGTTTATGGGCATGGCTTCCAATACGACTTCGGCGGGATCAGCGGAGGAGCTGGCACTGGTGAAGGTGGAGAACTACAACATGCCACCTGGTGGTTACGGCGGCGGCTGGCAGTCGGAGTCCATGCAGGGATCCAATGCTGCTCTCTTTACAATGTGGAATGACTAA 1473 0.4759 MNTHGSNVNEVPKVADFLGVGKSENQSDLAAFNEIQSNDSGYLFTNSSLVPMQSSVVDTSGNFEYQENNANSNLQSLTLSMGSGKDSICETSGDNSTNTAVEPAAPRRTLDTFGQRTSIYRGVTRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSSFQYGSGSSSRLQLQAYPLMQLDQTQPLLSLQNQEISQYSSLHHPSYIQTQLQLHHQTGSSNYNFHQSPSNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNDGGSSGSYSGGVGGFMGMASNTTSAGSAEELALVKVENYNMPPGGYGGGWQSESMQGSNAALFTMWND 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0083 490 CDD AP2 215 276 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 FunFam AP2-like ethylene-responsive transcription factor 215 276 - -
Lele29g0083 490 SMART rav1_2 216 280 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 SMART rav1_2 119 186 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 Pfam AP2 domain 120 172 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 Pfam AP2 domain 217 266 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 63 369 - -
Lele29g0083 490 ProSiteProfiles AP2/ERF domain profile. 119 180 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 ProSiteProfiles AP2/ERF domain profile. 216 274 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 CDD AP2 118 182 IPR001471 GO:0003700|GO:0006355
Lele29g0083 490 Gene3D AP2/ERF domain 216 276 IPR036955 GO:0003700|GO:0006355
Lele29g0083 490 Gene3D AP2/ERF domain 119 182 IPR036955 GO:0003700|GO:0006355
Lele29g0083 490 SUPERFAMILY DNA-binding domain 215 276 IPR016177 GO:0003677
Lele29g0083 490 SUPERFAMILY DNA-binding domain 118 182 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0083 Lele-ChrLele29 496016 498379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0083 11 490 AP2-EREBP Transcription Factor Family AT3G20840 64.486 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele29g0083 AP2 1.4e-05 CL0081