Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0082 ATGGAATCTTCAACTCCTCCCTCGCCGGAGCTCCACCTCAACAACCTCAGGGCACTCAAAGTCCTCGGTAAGGGTGGCATGGGCACCGTCTTCCTCGTCCACGACACCTCAACCGATCCCTCCGCCCACTCTCCCTTCGCCCTCAAGGTCCTCGACAAATCCTCCGTTAATTCCCACCACACCACCCTCGACTCCGACCGCCGTGCCCGCTGGGAAATCCAGGTCCTCACTCGTCTGTCCCACCCCTTCCTCCCCTCCCTTCTGGGAACCATCGAGTCCGACCAGCTTCTCGGTTGGGCTGTTCCTTATTGCCCTGGTGGTGATCTCCACGTCCTCCTCCAACGCCAAGTTGATCGGGTGTTCTACCCCGCTGTCATTCGCTTCTATTTGGCAGAGATCCTCTGCGCCCTCGACCATCTTCACGGCGTTGGCATCGCCTACCGCGATTTGAAGCCCGAGAACGTCCTCATTCAGCAGTCCGGCCACGTCACTCTCACCGACTTCGATCTCTCTCATAAGCTCAAACCCAAATCCATCAGAACGGTCATTTTGTCAACACCAGCTCAAGACAATTTCCCCGAAATCCGCCGGAAAAATCGCAGAAATTTGACTCGATGGCTCCCCACCGCACCGGAGAACAAGAAGGGGCTGAAGAAGGCGAAGTCTGCCCGAGTCAGCCCGGTGAGTCGACGGAAACCGAGTTTCTCTGGTGGTGAGAAGTCTAACTCGTTTGTGGGCACGGAAGAGTACGTATCGCCGGAGGTAGTGCGAGGCGACGGTCACGAGTTCGCCGTCGATTGGTGGGCTTTGGGAATATTAGCTTACGAGATGTTATACGGTAAGACGCCGTTCAAGGGGAGTAACCGGAAGGAAACCTTTCGGAATGTTCTGTTGAAAACACCGGAATTCATAGGAAAACGGACGGTACTGACGGATTTGATGGAGCGGCTACTGGAGAAGGATCCCACAAAGCGGTTGGGTTACGGGCGAGGCGCGTGCGAGATCAGGGAGCACGAATTCTTCAGAGGGGTACAGTGGGACCTACTGACGGAGGTAGTAAGGCCGCCGTTCATTCCGCCGAGGGAGGACGGCGTCGACCAAACTGTCAGTGGTACGGACATAACTGATTATTTCCGTAGGCTGAAATCGCCGCCGTCATTCCCTACATCGCGGTCGTCTGAGCATCAGAGGAATATCTCGTACGGAGAATTGTTTTGA 1218 0.5583 MESSTPPSPELHLNNLRALKVLGKGGMGTVFLVHDTSTDPSAHSPFALKVLDKSSVNSHHTTLDSDRRARWEIQVLTRLSHPFLPSLLGTIESDQLLGWAVPYCPGGDLHVLLQRQVDRVFYPAVIRFYLAEILCALDHLHGVGIAYRDLKPENVLIQQSGHVTLTDFDLSHKLKPKSIRTVILSTPAQDNFPEIRRKNRRNLTRWLPTAPENKKGLKKAKSARVSPVSRRKPSFSGGEKSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILAYEMLYGKTPFKGSNRKETFRNVLLKTPEFIGKRTVLTDLMERLLEKDPTKRLGYGRGACEIREHEFFRGVQWDLLTEVVRPPFIPPREDGVDQTVSGTDITDYFRRLKSPPSFPTSRSSEHQRNISYGELF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0082 405 SUPERFAMILY Protein kinase-like (PK-like) 13 394 IPR011009 -
Lele29g0082 405 Gene3D Transferase(Phosphotransferase) domain 1 238 360 - -
Lele29g0082 405 ProSiteProfiles Protein kinase domain profile. 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0082 405 PANTHER FLIPPASE KINASE 1-RELATED 10 366 - -
Lele29g0082 405 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Lele29g0082 405 SMART serkin_6 16 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0082 405 MobiDBLite consensus disorder prediction 385 399 - -
Lele29g0082 405 FunFam Serine/threonine-protein kinase UCNL 16 107 - -
Lele29g0082 405 Pfam Protein kinase domain 236 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0082 405 Pfam Protein kinase domain 19 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0082 405 Gene3D Transferase(Phosphotransferase) domain 1 108 187 - -
Lele29g0082 405 MobiDBLite consensus disorder prediction 383 405 - -
Lele29g0082 405 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
Lele29g0082 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele29g0082 405 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele29g0082 405 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0082 Lele-ChrLele29 483520 484737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0082 11 386 AGC Kinase Gene Family AT3G20830 61.598 9.72e-161 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele29g0082 Pkinase 2.3e-30 CL0016