Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0062 ATGGGAAGCTGCATATCCACGCCGGGCAAGACATTCCCTCGCAGGAGGTCCAAGGAGAGCGCCAAGTCATGCACAACCAAATCTGACTATCACGCGCCGCCACCGCTGCCGCCGCAAAAAGCCCTCAACGTCCGCCCAATCAACGTCGTCGAGGACCCGGTCCCGGACAACATCTTTGAAAAGTACGAGTTCGGCAAAGAACTGGGACGCGGCGAGTTCGGCGTGACGCACAAATGCGTGGAGATTGAGACCGGGAAGGCGTTCGCGTGCAAGAAGATCGCCAAGACGAAGCTTCGCACGGAGATTGATATCCAAGATGTGAGGAGAGAGGTGCAGATCATGAGGCATTTGCCAAAGCATCCTAATATCGTGAGCTTCAAGGAAGCTTACGAGGACAAGGACGCCGTGTATCTCATCATGGAGCTTTGTGAAGGAGGCGAGCTTTTTGACAGAATCGTCGCTAAAGGCCATTACACAGAACGTGCCGCGGCCAATGTTATCAATACAATTCTTGAGATTTGCAAGGTATGTCATGAACACGGGGTGATACACAGGGACTTGAAGCCTGAAAATTTCTTATTTGGAGATGCAAGTGAGTCTGCTCCAGTGAAAGCAATTGATTTTGGGCTTTCCACCTTCTATGAATCAGGACAGAGGTTTAATGAAATTGTTGGAAGTCCCTATTACATGGCTCCAGAAGTCTTGAGACGTAACTATGGGCCAGAAATTGATGTATGGAGCGCTGGCGTAATCCTTTATATTTTACTCTGTGGAGTTCCACCCTTTTGGGCAGAATCTGAGGAAGGGATAGCACAGGCCATCATCAGGGGAAACATCGATTTTGAAAGAGATCCTTGGCCTAAGGTTTCAGAAGAAGCAAAAAGCCTAGTTAAAAACATGCTCGATCCAAATCCATACAGCCGATTAAATATTCAAGAAGTTCTTGAACATCCGTGGATACAGAACAGAGACCAGGGTCCAAATGTTTATCTAGGAGACCATGTACGAATGAGAATCAAGCAATTTTCCTTGATGAACAAGTTCAAGAAGAAAGTTCTTCGAGTGGTGGCAGACAGCCTCCCAATTGAGCAAATAGATCGGATCAAGCAGATGTTCCATATGATGGACAAGGATAAAAATGGAAACTTGTCGTTTGAAGAGCTCAAAGATGGTCTTTCTAGAATTGGACATCCTCTCCCTGATCCCGATGTGCAGATGTTATTGGACGCAGCAGATACAGATGGAAATGGCACACTGAACTGTGAAGAGTTCATCACGATGAATGTCCATCTGGGGAAGATTGGAAGTGACGAGCTTCTCTCTGAGGCTTTTAGTTACTTTGACAAGAACAAGAATGGATTTGTGGAATTTGATGAATTGAGAGATGCCTTGCTGGATGATGACTTAGGTCCCTGTAATGACCAGGTGGTCCATGACATCCTATTTGAAGTCGACTTGGATAAGGACGGTCGAATCAGTTATGAGGAGTTCAAGGCGATGATGAAGACAGGACCAGATTGGAAAATGGCTTCTCGCCAATATTCAAGAGCAATGCTAAATGCGTTGAGCTTCAAAATGTTCAATAACAAATCTGTGAAATGTGTCTAA 1608 0.4596 MGSCISTPGKTFPRRRSKESAKSCTTKSDYHAPPPLPPQKALNVRPINVVEDPVPDNIFEKYEFGKELGRGEFGVTHKCVEIETGKAFACKKIAKTKLRTEIDIQDVRREVQIMRHLPKHPNIVSFKEAYEDKDAVYLIMELCEGGELFDRIVAKGHYTERAAANVINTILEICKVCHEHGVIHRDLKPENFLFGDASESAPVKAIDFGLSTFYESGQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAQAIIRGNIDFERDPWPKVSEEAKSLVKNMLDPNPYSRLNIQEVLEHPWIQNRDQGPNVYLGDHVRMRIKQFSLMNKFKKKVLRVVADSLPIEQIDRIKQMFHMMDKDKNGNLSFEELKDGLSRIGHPLPDPDVQMLLDAADTDGNGTLNCEEFITMNVHLGKIGSDELLSEAFSYFDKNKNGFVEFDELRDALLDDDLGPCNDQVVHDILFEVDLDKDGRISYEEFKAMMKTGPDWKMASRQYSRAMLNALSFKMFNNKSVKCV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0062 535 SUPERFAMILY EF-hand 349 515 IPR011992 -
Lele29g0062 535 Pfam Protein kinase domain 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0062 535 SMART serkin_6 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0062 535 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 497 - -
Lele29g0062 535 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Lele29g0062 535 MobiDBLite consensus disorder prediction 1 38 - -
Lele29g0062 535 ProSiteProfiles Protein kinase domain profile. 62 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele29g0062 535 ProSiteProfiles EF-hand calcium-binding domain profile. 363 398 IPR002048 GO:0005509
Lele29g0062 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Lele29g0062 535 Pfam EF-hand domain pair 440 502 IPR002048 GO:0005509
Lele29g0062 535 FunFam calcium-dependent protein kinase 13 148 328 - -
Lele29g0062 535 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Lele29g0062 535 CDD STKc_CAMK 61 319 - -
Lele29g0062 535 Gene3D - 329 503 - -
Lele29g0062 535 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Lele29g0062 535 FunFam Calcium-dependent protein kinase 1 64 147 - -
Lele29g0062 535 SMART efh_1 476 504 IPR002048 GO:0005509
Lele29g0062 535 SMART efh_1 367 395 IPR002048 GO:0005509
Lele29g0062 535 SMART efh_1 403 431 IPR002048 GO:0005509
Lele29g0062 535 SMART efh_1 439 467 IPR002048 GO:0005509
Lele29g0062 535 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Lele29g0062 535 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Lele29g0062 535 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Lele29g0062 535 Gene3D Transferase(Phosphotransferase) domain 1 148 328 - -
Lele29g0062 535 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Lele29g0062 535 FunFam Calcium-dependent protein kinase 7 329 505 - -
Lele29g0062 535 Pfam EF-hand domain pair 380 427 IPR002048 GO:0005509
Lele29g0062 535 Gene3D Phosphorylase Kinase; domain 1 64 147 - -
Lele29g0062 535 CDD EFh 367 427 IPR002048 GO:0005509
Lele29g0062 535 SUPERFAMILY Protein kinase-like (PK-like) 59 326 IPR011009 -
Lele29g0062 535 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0062 Lele-ChrLele29 352469 354701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0062 1 527 EF-hand Containing Proteins AT2G31500 69.794 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele29g0062 Pkinase 7.7e-77 CL0016