Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0050 ATGGAATTTATCCACGGATTGATTGCGTTTTCAGATGAAAAGTGGATCCTTGTTGCTGCAGTGGAGTTTGGAATTGATGGCTCTATTCATGGTGAGACAGTAGGAAATGCTATTGTGAGAGATGTTGGCTGTATAGAGGTTGAAAGCAAAACAGGCGGTAGTTCAGTTGAACCAACTTATAAACAAGATCAAGATGATACATTGGCTCAAGATTCTTCTGGAGGGGATACAATTCCATCAGGAGTTCCTGCAGTATCAGCTGTTTCAGCTGAGGAGCCCTATGTGGGTCAAGAGTTTGAGTCGGAAGCAGCAGCTCATGCTTTTTATAATGCATATGCCACAAATGTTGGATTTGTCACACGTGTAAGTAAACTCTCTCGATCAAGACGTGATGGATCTGCTATTGGACGGGCACTTGTTTGCAATAAAGAGGGTTACAGAATGCCTGACAAGCGCGAAAAGATTGTAAGGCAAAGGGCAGAGACTAGGGTTGGCTGTAGGGCGATGATTTTGGTTAGGAAAGTAAGTTCTGGTAAATGGGTGGTTACAAAGTTTGTTAAAGATCACACACATCCTTTGACGCCAGGAAAAGGTAGAAAGGATTGCATTTATGAACAATACCCGAATGAACATGATAAAATCCGGGAACTCTCCCAGCAGTTGACTATAGAGAAGAAGCGAGCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCATATTGAGGAGCACAATGAAAGTCTTTCGAAGAAAATACAGCACATAGTAGACAATGTGAAGGAGATGGAAAGCAAAGGACCACAGAGTCATAGATAG 819 0.42 MEFIHGLIAFSDEKWILVAAVEFGIDGSIHGETVGNAIVRDVGCIEVESKTGGSSVEPTYKQDQDDTLAQDSSGGDTIPSGVPAVSAVSAEEPYVGQEFESEAAAHAFYNAYATNVGFVTRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKDHTHPLTPGKGRKDCIYEQYPNEHDKIRELSQQLTIEKKRAATYKRHLELIFEHIEEHNESLSKKIQHIVDNVKEMESKGPQSHR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0050 272 MobiDBLite consensus disorder prediction 50 79 - -
Lele29g0050 272 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 46 265 - -
Lele29g0050 272 Coils Coil 246 266 - -
Lele29g0050 272 Pfam FAR1 DNA-binding domain 108 194 IPR004330 -
Lele29g0050 272 MobiDBLite consensus disorder prediction 52 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0050 Lele-ChrLele29 302305 305986 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele29g0050 FAR1 4.8e-30 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0050 29 302305 305986 Lele31g1494 31 20243717 20247429 hybridization
Lele29g0050 29 302305 305986 Lele32g0052 32 315559 319396 hybridization