Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele29g0045 | ATGAAAATCCAGTGCGATGTGTGTGAGAAAGCTCCCGCAACGGTGATTTGTTGCGCTGACGAGGCTGCTTTATGTGCTAAATGCGACATTGAAGTTCATGCTGCCAACAAGCTAGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCTACCAAGCTTCCCACATGCGACATCTGCCAAGACAAGCCAGCTTTTATATTTTGCGTTGAAGACAGAGCGCTGTTCTGTGAAGCTTGTGATGAACCAATTCATTCAGCTGGCAGCCTTTCTGCAAACCACCAGCGCTTCCTGGCAACCGGTATTCGGGTGGCTTTGAATTCGGACTGCTCCAAGGACAACGAAGAACGTCGCTTGGAGCCACCTAATCGGAGTGCTCAACAAGCTTCTGCAAAAGCCCCCCTTCAGCCTCAGCAAGTTCCGACCTTCACATCCTCTTGGGCTGTGGATGACTTGTTGGAATTCACTGACTTCGAATCGCCTGACAAGAAAGAATCACTGGAGTTTGGAGAGCTGGAATGGTTATCGGATGTGGGTCTTTTCGGAGAACAATTTCCTGGTGGGGAGGCGTTGGCGGCAGCTGAAGTCCCACAGCTTCCAGTAACACCAGCTAGCAACGTTGCCTCATACAGACCCTCTAAGTCTTTCATGTCTCTCAAGAAGCCTCGGATTGAATTTGAAGACGATGATGAGCACTTTACAGTGCCTGATCTTGGTTGA | 720 | 0.5014 | MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSTKLPTCDICQDKPAFIFCVEDRALFCEACDEPIHSAGSLSANHQRFLATGIRVALNSDCSKDNEERRLEPPNRSAQQASAKAPLQPQQVPTFTSSWAVDDLLEFTDFESPDKKESLEFGELEWLSDVGLFGEQFPGGEALAAAEVPQLPVTPASNVASYRPSKSFMSLKKPRIEFEDDDEHFTVPDLG | 239 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele29g0045 | 239 | MobiDBLite | consensus disorder prediction | 113 | 137 | - | - | |
Lele29g0045 | 239 | Gene3D | Classic Zinc Finger | 1 | 92 | - | - | |
Lele29g0045 | 239 | MobiDBLite | consensus disorder prediction | 123 | 137 | - | - | |
Lele29g0045 | 239 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Lele29g0045 | 239 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 238 | - | - | |
Lele29g0045 | 239 | CDD | Bbox1_BBX-like | 57 | 98 | - | - | |
Lele29g0045 | 239 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
Lele29g0045 | 239 | ProSiteProfiles | Zinc finger B-box type profile. | 52 | 99 | IPR000315 | GO:0008270 | |
Lele29g0045 | 239 | Pfam | B-box zinc finger | 53 | 95 | IPR000315 | GO:0008270 | |
Lele29g0045 | 239 | SMART | bboxneu5 | 52 | 99 | IPR000315 | GO:0008270 | |
Lele29g0045 | 239 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele29g0045 | Lele-ChrLele29 | 280518 | 282028 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele29g0045 | 1 | 163 | Orphan Transcription Factor Family | AT1G06040 | 68.452 | 6.37e-68 | 205 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | DBB | Lele29g0045 | zf-B_box | 6.2e-08 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele11g0477 | 11 | 4587647 | 4589161 | Lele29g0045 | 29 | 280518 | 282028 | CCT | |
Lele29g0045 | 29 | 280518 | 282028 | Lele31g1500 | 31 | 20267994 | 20269482 | hybridization | |
Lele29g0045 | 29 | 280518 | 282028 | Lele32g0046 | 32 | 291629 | 293162 | hybridization |